DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13326 and armc3

DIOPT Version :9

Sequence 1:NP_610838.1 Gene:CG13326 / 36439 FlyBaseID:FBgn0033794 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_001001246.1 Gene:armc3 / 407950 XenbaseID:XB-GENE-971492 Length:863 Species:Xenopus tropicalis


Alignment Length:963 Identity:195/963 - (20%)
Similarity:357/963 - (37%) Gaps:244/963 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FTEVSVPIKKLDTALLLLSSKEECVLLTIFSHITDFARRQDVNVLELKAHRLLELLLEKDL--FI 88
            |..:.:..||..||:|:|.|.||.:|......:..||::.:.|.|     .||||.....|  .|
 Frog    17 FDPLPIESKKAATAVLMLQSPEEEILAKSCDALYKFAKKGEENKL-----ALLELGAVDPLSKLI 76

  Fly    89 ASENTMIRRFAL---------YLLTALLDNTD-----MSTYEPEQADQILELACRFYMKEVDDFC 139
            :.|:.::||.|.         |.:..||...|     ::...||:...|.|.|         ..|
 Frog    77 SHEDKIVRRNATMVCGIMASHYDVRKLLRKLDIIPSLIARLTPEEEVVIHEFA---------TLC 132

  Fly   140 IEYLTYILNVCLKDPQMAHGIVEATEFLEKFK----------LVFISSENPDTVFNSIEALHRML 194
            :.|:                   |.|:..|.:          :..:||.:||...|..|.::  |
 Frog   133 LAYM-------------------AAEYTSKTQIHELNGLEPLIKLLSSPDPDVKKNCAECIY--L 176

  Fly   195 LV---QSADQMLDFTTQPDFPVDRIICEVTNEFQEIRKAALKTLKTLLADTGDDSVFEALHRCYF 256
            |.   ||...:.:....|  |:..::   .:|:..|::..|:||..|      .|..||.|  .|
 Frog   177 LAQEFQSRSAVWELNAIP--PLLELL---KSEYPVIQQLTLRTLGCL------SSEVEARH--IF 228

  Fly   257 ----VLEQLVKVFCESPQGPEAADVIEVLATALRSEKMTKLFFEQNLFDQVVEQVRNHMDLMPL- 316
                |||||:||...........|.:.|:|..|...:...:..:.....:::|    ..:..|| 
 Frog   229 IENQVLEQLLKVLETKEFHDLHVDTLLVIANCLEDVEALHILQQSGGLKRILE----FAETTPLP 289

  Fly   317 EMRCTIISIFAETAQYEQFLPRMHKAEIADMFLTCLMQNKPAPAAYVIQGLHRMSHHPEALRRIV 381
            |.:.......::.||.::.....|:.|:..:.::.|..:.....|.....:..|..:.|:..   
 Frog   290 EAQMNAAKAISKAAQNDENRKFFHEQEVERILVSMLDTDNDEVKAAACLAIAAMGENLESKN--- 351

  Fly   382 AAYQEGAIRKLVAILMSPDVAIKAREQAGEFLSRLLV--AAFRETAAQLQEQDIAVVLTAVIAQG 444
             .:.:..|.:::.:|......:  ||.|...|:.|..  .|.....|:....|..:.|.:....|
 Frog   352 -VFNKQGIPQIITLLTRESAEV--RESAAFVLANLTTNCPANASAVAEADGVDALINLLSDKRDG 413

  Fly   445 QPTLSIDLILLLLTIIESLAQKEEYRTILGEYSSLTEQLAQLLMRSFAHSILVNNIFRCLCTLID 509
                   :|:...|::.::|.:|..|.|| |...|...|.:.|..|  ::::::.....:.::..
 Frog   414 -------VIMNACTVLINMAAQEPLRLIL-ETHGLVHALIEPLHSS--NNMVLSKAALTVASIAC 468

  Fly   510 EAPVRETLLANYIVSSMKRALKSLSNLVKTSVTNFILQTTRFNEF--IDAYIDRGIMEVLLDF-- 570
            :|.:|..|.....:..:.:.|:...|.|:.|.. :.:.....:|.  ::.| ..|.:::|.:.  
 Frog   469 DADIRTDLRNAGGLPPLVKLLQCDHNEVRRSAC-WAVAVCASDELTAVELY-KLGALDLLQELNL 531

  Fly   571 ---QKHAFCISTWGPAIESILSKCPTMKFAIRNCLTFTDITAGKDFYVSRRKFEDFR--KFQDIL 630
               :::.|  |.|  |:..:|.....:|::.:..|:::::.. ..||...|...|.:  ..:::.
 Frog   532 SRSRRNNF--SEW--ALNKLLDNNLPLKYSQKGYLSYSNLIE-DGFYDCGRIKPDAKLLPLEELS 591

  Fly   631 RNDCSPLDAVLVMNFDRP---------------------------------------KPNQNDVI 656
            :.:.:...||:::|...|                                       ||.|    
 Frog   592 KQELNQNRAVILINAKSPDLAPAAVAPPAEEKQESVGARSSYSRNASREKAGAPAEEKPEQ---- 652

  Fly   657 AVPLRCLSTITDLPGDQGWGYCKRPG----------------DNNLPQYLEALNQTLAMHG---- 701
                    .:...|...|....|..|                :..:.|:|:  ||:|.:..    
 Frog   653 --------AVVRTPSSHGRSASKEKGSKGKVRLKKEEEKPKEEEEVAQFLQ--NQSLIVSENKDW 707

  Fly   702 -----------LVENPERVRRTIDF-ENVAKRSKLIAQAVNAVMSENLKILDLNSTEECCRNTVR 754
                       |.|..:.:....|. |.|.:.:||:|:.:...: |..::.|.         :..
 Frog   708 QPPYDQELNDCLTEASKMILPLSDIKEQVVELAKLVARKMGGPI-EKERLHDF---------SWE 762

  Fly   755 CHLQELRHVLHTNFIPLGMVRSGCQFERAILFKGLADQIGLPCTLQRSVDGRMLYNELPLP---- 815
            .|:.||:..|.:|.||:|.::.|..:.||:|||.|||::|:...|.|...|| .:||:.|.    
 Frog   763 LHISELKFALKSNVIPIGKIKKGTFYHRALLFKVLADRVGISSCLIRGEYGR-AWNEVRLTGSLQ 826

  Fly   816 -----LEPEKDVHCDKKTLKYMPWRMLRPTHVVDLLYNVGELYPMQSRQALQY 863
                 |.|.|                   |:||||::..|.|....|..|..|
 Frog   827 EITRGLPPPK-------------------TYVVDLMFEPGRLLVHGSADADNY 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13326NP_610838.1 EDR1 <759..799 CDD:291079 17/39 (44%)
armc3NP_001001246.1 armadillo repeat 62..94 CDD:293788 10/31 (32%)
armadillo repeat 104..136 CDD:293788 8/40 (20%)
armadillo repeat 144..179 CDD:293788 8/36 (22%)
PLN03200 155..>405 CDD:215629 56/274 (20%)
armadillo repeat 184..218 CDD:293788 7/38 (18%)
HEAT repeat 276..301 CDD:293787 4/28 (14%)
HEAT repeat 317..345 CDD:293787 3/27 (11%)
armadillo repeat 352..383 CDD:293788 6/32 (19%)
Arm 387..426 CDD:366143 7/45 (16%)
armadillo repeat 391..427 CDD:293788 6/42 (14%)
HEAT repeat 435..466 CDD:293787 6/33 (18%)
ARM 469..504 CDD:214547 7/35 (20%)
armadillo repeat 473..503 CDD:293788 6/30 (20%)
EDR1 <712..849 CDD:373038 44/166 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113174at33208
OrthoFinder 1 1.000 - - FOG0009670
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 1 1.000 - - X7410
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.040

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