DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13326 and Rsph14

DIOPT Version :10

Sequence 1:NP_610838.1 Gene:CG13326 / 36439 FlyBaseID:FBgn0033794 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_001388438.1 Gene:Rsph14 / 365552 RGDID:1305601 Length:341 Species:Rattus norvegicus


Alignment Length:296 Identity:62/296 - (20%)
Similarity:111/296 - (37%) Gaps:76/296 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 ICEVTNE----FQEIRKAALKTLKTLLADTGDDSVFEALHRCYFVLEQLVKVFCESPQGPEAADV 277
            :|::.::    ::.|....|::||.||.|  ||:              ||::        :..:|
  Rat    50 LCDLMHDPEYVYEAINIGCLESLKALLKD--DDN--------------LVRI--------KTTEV 90

  Fly   278 IEVLAT-------ALRSE---KMTKLFFE-QNLFDQVVEQVRNHMDLMPLE----MRCTIISIFA 327
            :.::||       .|:.:   .:::|..: |.|..:.:.|...|:..:|..    :...:||...
  Rat    91 LYIMATHNVGRVGFLKHDIILALSRLLSDHQTLCRENLHQAYKHLAQLPEGAQGIVTSGLISFLV 155

  Fly   328 ETAQYEQFLPRMHKAE-IADMFLTCLMQNKPAPAAYVIQGL-----HRMSHHPE----ALRRIVA 382
            ...|.|:    :|..| |.|....||.::  |..|...|.:     ...|.:|:    |.|.::|
  Rat   156 RKLQKEE----LHIQEIILDTLALCLQED--ATEALNSQAVPCFKEKLFSGNPQIRSKAARALIA 214

  Fly   383 ----------AYQEGAIRKLVAILMSPDVAIKAREQAGEFLSRLLVAAFRETAAQLQEQDIAVVL 437
                      .:|...|..||.:|...|..:|| ..||..:...:....:..|......|..:.|
  Rat   215 ISIPLDGKRQVWQNEVIPILVDLLSDTDEEVKA-NAAGALMHATVTTEGKYAALDANAIDPLLEL 278

  Fly   438 TAVIAQGQPTLSIDLILLLLTIIESLAQKEEYRTIL 473
            ...|    ||..:  .|.....:..||:..|.|.:|
  Rat   279 LCSI----PTTKV--CLNATKALTMLAEAPEGRKLL 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13326NP_610838.1 EDR1 <758..799 CDD:433922
Rsph14NP_001388438.1 HEAT repeat 27..55 CDD:293787 1/4 (25%)
HEAT repeat 72..93 CDD:293787 10/44 (23%)
HEAT repeat 109..137 CDD:293787 5/27 (19%)
HEAT <151..253 CDD:441023 28/108 (26%)
HEAT repeat 151..175 CDD:293787 8/27 (30%)
armadillo repeat 190..215 CDD:293788 4/24 (17%)
HEAT 204..>338 CDD:441023 25/112 (22%)
armadillo repeat 222..257 CDD:293788 10/35 (29%)
armadillo repeat 263..295 CDD:293788 7/37 (19%)
HEAT repeat 308..334 CDD:293787 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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