DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13326 and gudu

DIOPT Version :10

Sequence 1:NP_610838.1 Gene:CG13326 / 36439 FlyBaseID:FBgn0033794 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster


Alignment Length:688 Identity:127/688 - (18%)
Similarity:258/688 - (37%) Gaps:187/688 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EAKSTYPDRTKSEEKSFTEVS----VP-----IKKL--------DTALLLLSSKEECVL--LTIF 55
            ::.:|..:.:..||:.:.||:    :|     |:||        .||.::    ..|.|  ..:.
  Fly    38 DSDTTEVESSTDEEERWKEVARAAEIPADYYNIQKLVKYIKAGNQTATIV----SLCCLKDYDLS 98

  Fly    56 SHITDFARRQD------VNVLELKAHR----LLELLLEKDLFIASENTMIRRFALYLLTALLDNT 110
            :.|..||....      ||:||....:    .|::|.:..|.|....|::....:.|:..:|:::
  Fly    99 TQINQFAISDIGGLDVLVNILECSDTKCCLGALKVLSDITLNIDIRKTIVDLDGIPLIVDILNSS 163

  Fly   111 --DMSTYEPEQADQILEL-ACRFYMKEVDDFC--IEYLTYILNV---CLKDP--QMAHGIVEATE 165
              |:.|...|....:.:: ..|.|::.    |  |..|..::::   .||.|  |::...:|:.:
  Fly   164 MKDLKTMAAETLANVCKVRLARKYVRT----CGGIPKLVDLIDIKLSILKTPRDQLSPDDLESLD 224

  Fly   166 FLEK-----FKLVFISSENPDTVFNS---------IEALHRMLLVQSADQMLDFTTQPDFP---- 212
            ....     |.|. .|..|.:.:..|         :::.|..:::.....:...:::|.|.    
  Fly   225 MTRAGARALFTLA-DSKHNMEQMRKSGIVPLMAQLLKSCHIDVVIPIMGTVRKCSSEPKFQLAIT 288

  Fly   213 ----VDRIICEVTNEFQEIRKAALKTLKTLLADTGDDSVFEALHRCYF--VLEQLVKVFCESPQG 271
                :..|:..:::|..|::...                ..|:::|.|  ....||:        
  Fly   289 TEGMIPDIVSHLSSENTELKMEG----------------STAIYKCAFDGTTRDLVR-------- 329

  Fly   272 PEAADVIEVLATALRSEKMTK---------------LFFEQNLFDQVVEQVRNHMDLMPL----- 316
              .|..:|.|.|.::.:.:.:               ...:.|:  :|::|:|....|:.|     
  Fly   330 --EAGGLEPLVTIIKDKNVRENKPLLRGATGAIWMCAVTDANV--KVLDQLRTVNHLVALLNDEC 390

  Fly   317 -EMRCTIISIFAETAQYEQFLPRMHKAEIADMFLTCLMQNKPAPAAYVIQGLHRMSHHPEALRRI 380
             |:...:....:|..:::....::.:|......::.|..:.......:.:||...:..|:::|.:
  Fly   391 DEVLTNVTGAISECVRFQSNREQLRQAGGLPAMVSLLNSSHAPLLENLAKGLKECAEDPDSMRIL 455

  Fly   381 VAAYQEGAIRKLVAILMSPDVAIKAR------------EQAGEFLSRLLVAAFRETAAQLQEQDI 433
               ....|:|.:.::|.:|...::|.            ..:.| |.|.||.|.......|:.:||
  Fly   456 ---EDLDAVRLIWSLLKNPTTRVQAHAAYAICPCVRNANDSAE-LVRSLVGAMELVVGLLKSKDI 516

  Fly   434 AVVLTAV------IAQGQPTLSIDLILLLLTIIESLAQKEEYRTILGEYSSLTEQLAQLLMRSFA 492
             :||:||      |||.|..|:   ||..|.:|..||             .|.:....||..:.|
  Fly   517 -MVLSAVCAAIATIAQDQTNLA---ILTDLKVIYKLA-------------DLVQTTDDLLRMNLA 564

  Fly   493 HSILVNNIFRCLC--TLIDEAPVRETL--LANYIVS-------SMKRALKSLS-------NLVKT 539
            .::..     |.|  ...:|.....|:  :..|:.|       |...||:.||       .:.::
  Fly   565 AAVAA-----CACFGNNTEELGRLRTVTPIVTYMTSDNPLVHRSTAMALEKLSMDPQNCITMHQS 624

  Fly   540 SVTNFILQ----TTRFNEFIDAYIDRGIMEVLLDFQKH 573
            .|..|:|:    |.:..:...|...|.|.|:.|..:::
  Fly   625 GVVPFLLECIGSTNKELQLAAAGCLRNIRELALRAEEY 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13326NP_610838.1 EDR1 <758..799 CDD:433922
guduNP_609111.1 armadillo repeat 105..134 CDD:293788 6/28 (21%)
armadillo repeat 144..180 CDD:293788 6/35 (17%)
VRR_NUC <172..232 CDD:451466 11/63 (17%)
SRP1 214..557 CDD:227396 66/392 (17%)
armadillo repeat 245..275 CDD:293788 2/29 (7%)
armadillo repeat 286..318 CDD:293788 4/47 (9%)
armadillo repeat 328..362 CDD:293788 5/43 (12%)
armadillo repeat 411..447 CDD:293788 4/35 (11%)
armadillo repeat 453..484 CDD:293788 6/33 (18%)
armadillo repeat 494..526 CDD:293788 13/33 (39%)
Arm 614..652 CDD:425727 6/37 (16%)
armadillo repeat 619..652 CDD:293788 6/32 (19%)
Blue background indicates that the domain is not in the aligned region.

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