DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13326 and hmp-2

DIOPT Version :9

Sequence 1:NP_610838.1 Gene:CG13326 / 36439 FlyBaseID:FBgn0033794 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_001252425.1 Gene:hmp-2 / 173338 WormBaseID:WBGene00001979 Length:704 Species:Caenorhabditis elegans


Alignment Length:704 Identity:125/704 - (17%)
Similarity:222/704 - (31%) Gaps:234/704 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 VFISSENPDTVFNSIEALHRMLLVQSA---------------------DQMLDFTTQ--PDFPVD 214
            :.:.|.|..::|...|...|...::||                     .:|:...||  ....:|
 Worm    27 MLLHSTNSYSIFTDHEVETRTSRIRSAMFPDWIPPTSAAEATNSTTSIVEMMQMPTQQLKQSVMD 91

  Fly   215 RIICEVTNEFQEIRKAALKTLKTLLADTGDDSVFEALHRCYFVLEQLVKVFCESPQGPEAADVIE 279
            .:..|.:|:...:   :|..|..|:.|..:..|..|:||.|.:..:....|  :..|.:....:|
 Worm    92 LLTYEGSNDMSGL---SLPDLVKLMCDHDESVVARAVHRAYMLSREDPNFF--NAPGFDHRSFVE 151

  Fly   280 VLATALRSEKMT-------------------KLFFEQNLFDQVVEQVRNHMDLM----PLEMRCT 321
            .|..|.:|..:.                   .|.|......:::..:.:.::.:    ...:|..
 Worm   152 ALMAASKSSNVNVRRNAIGALSHMSEQRGGPLLIFRSGGLAEIIRMLYDSLESVVHYAVTTLRNL 216

  Fly   322 IISIFAETAQ------YEQFLPRMHK------AEIADMFLTCLMQNKPAPAAYV-IQGLHRMSHH 373
            ::.:....||      .|...|.:||      |::||.....|:.:.|:...:: :.|       
 Worm   217 LMHVSDSRAQARALNAVEALTPHLHKTNPKLLAQVADGLYFLLIDDAPSKITFLSLLG------- 274

  Fly   374 PEALRRIVAAYQEGAIRKLVAILMSPDVAIKAREQAGEFLSRLLVAAFRETAAQLQEQDIAVVLT 438
            |:.|..|:..|.:.  |||:                     ..:|...|.              .
 Worm   275 PQILVSILREYSDH--RKLI---------------------YTVVRCIRS--------------L 302

  Fly   439 AVIAQGQPTLSIDLILLLLTIIESLAQKEEYRTI--------LGEYSSLTEQLAQLLMRSFAHSI 495
            :|....:|.| |.|..|....:|....|:|....        |.:.::..|.|.||:::......
 Worm   303 SVCPSNKPAL-ISLGCLPALYVELCTAKDERSQTAILVAMRNLSDSATNEENLTQLIIKLLEIIR 366

  Fly   496 LVNN-IFRCLCTLIDEAPVRETLLANYIVSSMKRALKSLSNLVKTSVTNFILQTTRFNEFIDAYI 559
            :.|: :..|.|                         .:||||...:..|  .||...:..|||.:
 Worm   367 VANDGMTACAC-------------------------GTLSNLTCNNTRN--KQTVCSHGGIDALV 404

  Fly   560 D--RGIMEVLLDFQKHAFCISTWGPAIESILSKCPTMKFAIRNCLTFTDITAGKDFYVSRRKFED 622
            .  |.:.|| .:..:.|.|......|..|:..:..:   .:|.|..|.         |...:.|.
 Worm   405 TAIRRLPEV-EEVTEPALCALRHCTARHSLAEEAQS---ELRFCQAFP---------VILDQLET 456

  Fly   623 FR-----KFQDILRNDCSPLDAVLVMNFDRPKPNQ--NDVIAVPL------RCLSTITDLP---- 670
            .|     ....::||     .|:|..|.......|  |...||.|      |.::.|.:.|    
 Worm   457 LRTPVIKAALGVIRN-----SALLQTNLIELTQEQTANGHTAVSLTMDILRRAITAIEENPDIAV 516

  Fly   671 -GDQGWGYCK------------------------RPGDNNLPQYLEALNQTLA------------ 698
             |...||..:                        :.|:...|.:|:.|::.||            
 Worm   517 DGVPMWGVIEGAVSALHQLANHPAVAAACCDDIGQVGNPECPPFLDLLHRLLAHPRLGSMDDEVL 581

  Fly   699 -------MHGLVENPERVR-------RTIDFENVAKRSKLIAQAVNAVMSENLK 738
                   ::.|.:.|:..|       ..:..|:...:.|.:....|.|:| |||
 Worm   582 EREILGLLYQLSKRPDGARAVESTGVSALLMESRGSQYKSVVTYANGVLS-NLK 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13326NP_610838.1 EDR1 <759..799 CDD:291079
hmp-2NP_001252425.1 ARM 106..216 CDD:237987 18/111 (16%)
HEAT_2 106..>185 CDD:290374 15/80 (19%)
HEAT repeat 106..137 CDD:293787 9/30 (30%)
HEAT repeat 149..177 CDD:293787 4/27 (15%)
ARM 183..303 CDD:237987 24/163 (15%)
armadillo repeat 185..216 CDD:293788 2/30 (7%)
armadillo repeat 224..260 CDD:293788 9/35 (26%)
armadillo repeat 275..302 CDD:293788 9/63 (14%)
Arm 305..346 CDD:278915 9/41 (22%)
armadillo repeat 309..349 CDD:293788 9/40 (23%)
ARM 357..473 CDD:237987 29/160 (18%)
armadillo repeat 358..383 CDD:293788 5/49 (10%)
armadillo repeat 391..429 CDD:293788 10/38 (26%)
armadillo repeat 438..471 CDD:293788 6/44 (14%)
ARM 518..633 CDD:237987 17/115 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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