DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13325 and oac-12

DIOPT Version :9

Sequence 1:NP_001286373.1 Gene:CG13325 / 36437 FlyBaseID:FBgn0033792 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_504196.1 Gene:oac-12 / 183958 WormBaseID:WBGene00017061 Length:643 Species:Caenorhabditis elegans


Alignment Length:400 Identity:83/400 - (20%)
Similarity:154/400 - (38%) Gaps:103/400 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 SNPNVIDCLHGIRCMSLIWVITCHQYSVTLISPHINLFRAATWVEKPFASFILHGFISVDSFLVI 327
            |.|:....|.|||.::::.|:..|.|                      .:...:|::.||.|.|:
 Worm     4 SPPSKRQDLQGIRGIAILSVLGFHFY----------------------PTHFPNGYLGVDQFFVL 46

  Fly   328 GGLLVALIPLRLMDKTKGKL----NVPMMYLHRLIRIAPLLAMAIVVHMKLMPLISSGPLFVGGY 388
            .|.|:.:    |:.||: ||    .:...|..||.||.||  ..:.:.:.|:.|.:..|......
 Worm    47 SGFLMCM----LLTKTE-KLPIFTRISNFYARRLKRILPL--YLLFISLTLLALCTVFPEAAVLQ 104

  Fly   389 IGNSACKAGWYWTLLFVNN--------YTDAKCLA-----QSWYLSLDMQLYIISPILLISLYKW 440
            ...||.:|     |:|.:|        |.:...:|     .:|.||:::|.|.:.|::.: :..|
 Worm   105 NQESAARA-----LVFRSNRLSTGDEAYYEKLQVAVDLFTHTWSLSVEVQFYFVVPVVFL-VGNW 163

  Fly   441 -GKKAAAGIFILIILLSACLFATMMVNGYSMMITAASPEAMRDGYYATHTHATPWLIGFLFGYFL 504
             .:....|.:|.|.|.||..::.:..:               :.:.:.......:|||.|  .|:
 Worm   164 LSETRKYGFYIGIALTSAAFYSILPAD---------------EAFNSMFARIWQFLIGML--TFM 211

  Fly   505 HLNRGKKFQLSWVSVWSGWILCLAMIFTSIFALYPPSKWSDPDASTLAESFYYTLTRVGWALALC 569
            ..|..:.|..|.:.    :::.|||..|..|....|         |....|.:|:......|.  
 Worm   212 LSNNSETFSGSRLK----YVILLAMPITIAFPTQLP---------TNIVRFLFTILTASLMLI-- 261

  Fly   570 WVIFACVQGYGGLANSFLASPLWQPLSRLSYSVFI--WHMFFMEMNARSTRTSTYFSDYGMMLNF 632
                       ...::.|::.|...:..:|||:::  |.::..   ::.|....|::..|.:  |
 Worm   262 -----------SADDTILSNRLLTYIGDISYSLYLVHWPIYAF---SKLTYGDNYYAFTGGL--F 310

  Fly   633 WSTLGFTLLF 642
            .|.|...::|
 Worm   311 ISVLLAIIIF 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13325NP_001286373.1 NRF 85..198 CDD:214781
Acyl_transf_3 268..648 CDD:280013 80/394 (20%)
OafA 299..654 CDD:224748 73/363 (20%)
oac-12NP_504196.1 OafA 1..342 CDD:224748 82/399 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.