DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13325 and ndg-4

DIOPT Version :9

Sequence 1:NP_001286373.1 Gene:CG13325 / 36437 FlyBaseID:FBgn0033792 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_001022618.1 Gene:ndg-4 / 175582 WormBaseID:WBGene00003577 Length:687 Species:Caenorhabditis elegans


Alignment Length:743 Identity:163/743 - (21%)
Similarity:290/743 - (39%) Gaps:179/743 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GNPNSD-DVLPQFRNVRQ----LRSLGIEFTEYFRNIS--TQDLGGLES----QFSSEDDLLCLN 72
            |..|.| :.:|:|.|..:    :.|...:|.:.|.:..  |...||.:|    ..|.::......
 Worm    40 GGKNLDLEKMPKFCNASKELPVMDSCKKQFEKIFCSADRWTDTFGGCQSIANKSLSEQEQCSKCA 104

  Fly    73 DMKALMTGLGSAEYWALKMIDAWGSIPSGLLAGNSYDLGNFDECLNIRKEIGQERTIQGKYCFLS 137
            ..||       ...|.||..|:.|...:|:..||.|.||:::.|    ..:..:.:..|:||.:.
 Worm   105 YQKA-------NNGWVLKWFDSLGKPAAGITDGNYYWLGDYELC----AALASDGSFDGQYCRIE 158

  Fly   138 VSPAKILGIE-----TSIGSFRTATCFPASCSAINMNAFVDQLMMKLLNVSVPSSAMRISEGSCQ 197
            :. ....|:|     |...|.....|||::||..::.. |..:.:. .|:.|          .|:
 Worm   159 ME-VPDAGVESGCPQTDPLSIILGVCFPSACSVADLTT-VSSIYLP-YNLKV----------ECE 210

  Fly   198 TSDSEPWDALTIFMIVILSLMSFIVALSTLWDYFLVKDQDQLPAIVKICSARSNSRALFRVVESH 262
            :.:.  |..:|:.:::||.:.....|::|    |.....|   :|:...|...|::..|......
 Worm   211 SQNR--WSFVTVLLLIILMVWIVPQAVAT----FQTSSND---SILSCFSIPDNAKRTFSTRRES 266

  Fly   263 SNPNVIDCLHGIRCMSLIWVITCHQYSVTLISPHI-NLFRAATWVEKPFASFILH---------- 316
            .|.:|:   ||:..:....:::...|:..|  |:| |:..|...|    :||.:|          
 Worm   267 PNLHVV---HGLEFLLFFTIVSGMVYNFML--PYIENVAFAFEGV----SSFPMHIVNNYSYQID 322

  Fly   317 GFISVDSF----LVIGGLLVALIPLRLMDKTKGKLNVPMMY-LHRLIRIAPLLAMAIVVHMKLMP 376
            |.:::.:|    |:.|.:|.              |.....| |.||.|..|...:.::....:.|
 Worm   323 GLLALSAFYTTYLLFGNILT--------------LRSAFDYILMRLFRFWPAYIVCVLFMYVIFP 373

  Fly   377 LISSGPLFVGGYIGNSACKAGWYWTLLFVNNY---TDAKCLAQSWYLSLDMQLY--IISPILLIS 436
            .:||||:::.....| .|.:||:..:||:||:   ||. |:...:.:|::.|.|  :|..|.|.|
 Worm   374 GVSSGPMWIHTDTVN-RCGSGWWKNILFINNWFNVTDT-CVDIGYVISMEAQYYAILIFVIFLSS 436

  Fly   437 LYKWGKKAAAGIFILIILLSACLFATMMVNGYSMMITAA-----SPEAMRDGY-------YATHT 489
            .|    .....:|...:..|:.:|:  .|..||..:..|     .|..:...|       .:...
 Worm   437 KY----PLLTQLFAYTVFGSSIIFS--FVRAYSQELPPAPMLTLEPVPLTKVYAVFDQLLLSLFA 495

  Fly   490 HATPWLIGFLFG----------------YFLHLNRGKKFQLSWVSVWSGWILCLAMIFTSIFALY 538
            .::.:.:||:||                |.:|....              |:|:|.........:
 Worm   496 RSSNYCLGFIFGIGCATASDELRESGLSYCMHKLLA--------------IICIAFAVVPFVGAF 546

  Fly   539 PPSKWSDPDASTLAESFYYTLTRVGWALALCWVIFACVQGYGGLANSFLASPL-WQ---PLSRLS 599
            |.|.::......:..:.|..|.|..|:.||...::.|  .:|..:..:|.:.| |:   |||:::
 Worm   547 PYSAYAWVSNFEIMNASYAALHRPMWSFALLSFVYLC--HHGAFSKEWLNALLEWRVFAPLSKVT 609

  Fly   600 YSVF-----IWHMFFMEMN--ARSTRTSTYFSDYGMMLNFWSTLGFTLLFSYAMHLLIEAPIGGL 657
            :...     |...||..:|  |.:|..||.:           |...|.|.:|.:.:.       |
 Worm   610 WIALVVAEPIILYFFSSLNKPAYATHWSTMY-----------TAISTALLAYFVAMF-------L 656

  Fly   658 DIFL-RP-KGKISPTEKQ---TSHIDDK 680
            |||: || :..|.|.:|.   .:|..|:
 Worm   657 DIFVTRPIRYLIYPEQKHRYAQAHTQDQ 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13325NP_001286373.1 NRF 85..198 CDD:214781 28/117 (24%)
Acyl_transf_3 268..648 CDD:280013 94/439 (21%)
OafA 299..654 CDD:224748 87/413 (21%)
ndg-4NP_001022618.1 NRF 110..215 CDD:214781 28/123 (23%)
OafA 325..668 CDD:224748 87/398 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1171418at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11161
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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