DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drl-2 and ryk

DIOPT Version :9

Sequence 1:NP_001286371.1 Gene:Drl-2 / 36436 FlyBaseID:FBgn0033791 Length:648 Species:Drosophila melanogaster
Sequence 2:XP_012825927.1 Gene:ryk / 550026 XenbaseID:XB-GENE-485290 Length:601 Species:Xenopus tropicalis


Alignment Length:660 Identity:198/660 - (30%)
Similarity:319/660 - (48%) Gaps:150/660 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LNIFISHHEVMKLMGLEADLFYVHEGAINTYAMHFTVPVPADVHELEFSW--QSLIAYPLPYAIS 89
            ||:::|..||.:|:||:|:|:|:....||.||:.|.:.||::.:.|.|:|  :|.:.|.|.:.: 
 Frog    54 LNLYLSEEEVRRLIGLDAELYYIRNDIINHYALSFNLLVPSETNSLHFTWHAKSKVEYKLGFQV- 117

  Fly    90 IEYNNDQEALGTPTLSIPHKGLVPQEIESFLVYLPCTGNASLQMPVNVNMVVRAPPRFNDTRLHF 154
                ::..|:..|..:|..:|.||..:..|.|.|.|:|....::...:.:.:......|.|.|:|
 Frog   118 ----DNPMAMTMPLTNISMQGEVPSSLTVFRVDLYCSGKMDSEVLFLMQLNITISSAKNITVLNF 178

  Fly   155 KRNKICAKGISPEPNQSPA------------PAH-APSQGPAL--LSAAACALGLVLAVGLVASM 204
            ||.|:|.:.:  |..:.|.            |.: ||:....:  :|...|. .::..|.::.::
 Frog   179 KRRKMCYRKL--EDIKVPVLQDKNNTRIHFDPVNVAPTTSTRVFYISVGVCC-AVIFLVAIILAV 240

  Fly   205 MYVRARKQLRQDSLHTSFTTAAYGSHQNVFIRLDPLGRPPSATGSYATIASLNKYPADSKKSCSI 269
            :::.:.|::..|                                             ||....| 
 Frog   241 LHLHSMKRVELD---------------------------------------------DSMSDSS- 259

  Fly   270 FDRFRSSPTPTPYATALLPMNLEQTAETIYSKPESICPSRISYYASSQLTQPCSLSTPKSIRSNG 334
                                                        :|..|:|| |..|.:.:|::.
 Frog   260 --------------------------------------------SSQGLSQP-STQTTQYLRADT 279

  Fly   335 NGNCTSGSGSLSLFGGIPTGSTITMASHGEKGNQRLRRIT------SVQPGALSYE-----ELVK 388
            ..|.|..:.|    .|.||       ...||.:  |:.:|      .|:..|:|.|     ::::
 Frog   280 PNNATPVTSS----SGYPT-------LRIEKND--LKSVTLQEAKAKVKDIAISRERVTLKDVLQ 331

  Fly   389 EGTFGRIYAGKLGESCE------ALVKTVIDGASLTQVACLLQDASLLIGVSHQHILAPLLANTE 447
            |||||||:.|.|.:..:      ..||||.|.||..|:..:|.::..|.|:.|:::|......||
 Frog   332 EGTFGRIFHGILVDEKDPNKEKAVFVKTVKDQASEVQITMMLTESCKLRGLHHRNLLPIGHVCTE 396

  Fly   448 LPGPPEIAYPHPSKGNLKMYLQKSR----ESSTALSTRQLVEFGLHITKGLAYLHSLGIVHKDIA 508
            ....|.:..|:.:.||||::|::.:    .:..|:|.:.||...:.|..|::||....::|||:|
 Frog   397 DGEKPMVLLPYMNWGNLKLFLRQCKLVEANNPQAISQQDLVHMAIQIACGMSYLARREVIHKDLA 461

  Fly   509 TRNCYLDEESYVKICDSALSRDLFPDDYDCLGDNENRPLKWLSLESLQKRVYATQGDVWALGVTY 573
            .|||.:||...|||.|:||||||||.||.|||||||||::|::||||..:.:::.|||||.|||.
 Frog   462 ARNCVIDESLQVKITDNALSRDLFPMDYHCLGDNENRPVRWMALESLVNKEFSSAGDVWAFGVTL 526

  Fly   574 WELVTLAQMPHEEVDIFELTNYLAAGFRLEQPVNCPDEFFTVMNCCWHCEAKQRPTPSQLLSYLQ 638
            |||:||.|.|:.::|.||:..||..|:|:.||:|||||.|.||.|||..:.::||...||:..|.
 Frog   527 WELMTLGQTPYVDIDPFEMAAYLKDGYRIAQPINCPDELFAVMACCWALDPEERPKFQQLVQCLT 591

  Fly   639 DFHADLGMYI 648
            :||:.||.|:
 Frog   592 EFHSALGAYV 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Drl-2NP_001286371.1 WIF 37..156 CDD:280237 34/120 (28%)
PTK_Ryk 373..644 CDD:270639 123/291 (42%)
STYKc 389..637 CDD:214568 115/257 (45%)
rykXP_012825927.1 WIF 57..180 CDD:366878 37/127 (29%)
PTK_Ryk 317..597 CDD:270639 121/279 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 88 1.000 Domainoid score I7805
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68287
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D359098at33208
OrthoFinder 1 1.000 - - FOG0005256
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3777
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.020

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