DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drl-2 and Cad96Ca

DIOPT Version :9

Sequence 1:NP_001286371.1 Gene:Drl-2 / 36436 FlyBaseID:FBgn0033791 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster


Alignment Length:684 Identity:148/684 - (21%)
Similarity:261/684 - (38%) Gaps:166/684 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TSVSGYL-NI--FISHHEVMKLMGLEADLFYVHEGAINTYAMHFTVPVPADVHELEFSWQSLIAY 82
            ||:|..: ||  |:...:  :|.|:::    :..|..|:....:..|||          |:.|..
  Fly   172 TSISNVVHNISQFLPRFD--QLPGVQS----IRNGLPNSRPGGWYPPVP----------QNNIFG 220

  Fly    83 PLPYAISI-----------------EYNNDQEALGTPTLSIPHKGLVPQEIESFLVYLPCTGNAS 130
            |.|:..:.                 |...|:|.  |||..:......|   :|.....|.|.|  
  Fly   221 PPPFGNNYPPPPPNIPGVRGEQSGEEEQPDEEV--TPTTPVRISSTTP---KSRTKLTPITAN-- 278

  Fly   131 LQMPVNVNMVVRAPPRFNDTRLHFKRNKICAKGISPEPNQSPAPA---HAPSQGP-ALLSAAACA 191
                             |.||:.           |..|.::..|:   |..|..| .:.|..:..
  Fly   279 -----------------NSTRVE-----------SAIPAETTTPSGGHHNNSSSPITIFSLKSGT 315

  Fly   192 LGLVLAVG----LVASMMYVRARKQLRQDSLHTSFTTAAYGSHQNVFIRLDPLGRPPSATGSYAT 252
            :.:|:.||    .:|.::....|:                        ||..:.|....|.....
  Fly   316 IPIVVTVGGFFVAIAVLLAYLCRR------------------------RLCAISRTLKKTKEKEE 356

  Fly   253 IASLNKYPADSKKSCSIFDRFRSSPT------PTPYATALLPMNLEQTAETIYSKPESICPSRIS 311
            :|   |....|:.|.::.|..|:|..      |..:|...:|...:|...               
  Fly   357 LA---KKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMG--------------- 403

  Fly   312 YYASSQLTQPCS---LSTPKSIRSNGNGNCTSGSGSLSLFGGIPTGSTITMASHGEKGNQRLRRI 373
             .|:|||:...:   :|:| .:.|.|.|...|..|...|.||..:......|..||....|    
  Fly   404 -IATSQLSTGVTNGGVSSP-GVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDR---- 462

  Fly   374 TSVQPGALSYEELVKEGTFGRIYAGKLGESCEA------------LVKTVIDGASLTQVACLLQD 426
            .......|.:..::.||.||:::      .|||            .|||:.:.|:......||.:
  Fly   463 WEFPRYRLKFFNILGEGAFGQVW------RCEATNINGNEGITTVAVKTLKESATEVDRKDLLSE 521

  Fly   427 ASLLIGVSHQHILAPLLANTELPGPPEIAYPHPSKGNLKMYLQKSRE---------SSTALSTRQ 482
            ..::..:.....:..||.......|..:...:.::|.|:.||:.||.         .|..|::..
  Fly   522 LEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHYGNTHGKSNVLTSCD 586

  Fly   483 LVEFGLHITKGLAYLHSLGIVHKDIATRNCYLDEESYVKICDSALSRDLFPDD-YDCLGDNENRP 546
            |..|...:.||:.||.|.||:|:|:|.||..:.::...|:.|...:||:.... |:...:.: .|
  Fly   587 LTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGK-LP 650

  Fly   547 LKWLSLESLQKRVYATQGDVWALGVTYWELVTLAQMPHEEVDIFELTNYLAAGFRLEQPVNCPDE 611
            ::|::.|||...:::.:.|:|:.|:..||:|||...|:..:...::...:..|:|||:|.:|..|
  Fly   651 IRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRE 715

  Fly   612 FFTVMNCCWHCEAKQRPTPSQLLSYLQD-FHADL 644
            .:.:|..||..:.::||..::::..|.. .|.::
  Fly   716 LYNIMYYCWSHDPQERPLFAEIIQMLDKLLHTEM 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Drl-2NP_001286371.1 WIF 37..156 CDD:280237 25/135 (19%)
PTK_Ryk 373..644 CDD:270639 72/293 (25%)
STYKc 389..637 CDD:214568 69/269 (26%)
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 70/277 (25%)
PTKc 474..742 CDD:270623 69/274 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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