DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)2 and AT3G23060

DIOPT Version :9

Sequence 1:NP_001260933.1 Gene:Su(z)2 / 36432 FlyBaseID:FBgn0265623 Length:1396 Species:Drosophila melanogaster
Sequence 2:NP_188946.2 Gene:AT3G23060 / 821880 AraportID:AT3G23060 Length:480 Species:Arabidopsis thaliana


Alignment Length:568 Identity:115/568 - (20%)
Similarity:193/568 - (33%) Gaps:191/568 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SRDVRQFHDLITCRLCRGYMIDPTTVDYCYHTYCRSCILKHLL--RAVYCPECKASGGKEINELN 85
            |::|:   ..:.|.:|.....|.||:..|.||:|||||....:  |...||.|..:.|....| .
plant     7 SKEVK---PCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLE-K 67

  Fly    86 LKSDDTLRSLIYKLVPGLYQ--------------RECKELADFKEQHDLVDEQTTDEPEFFTTTE 136
            |:||.|.:.|..|:...:.:              :..|:....:....:...:.:..|:  |..|
plant    68 LRSDCTWQDLKLKIYRAMMESLKKAGPKTVAASVKSSKKKRKSRTSLRVSSSRVSSSPD--TPLE 130

  Fly   137 LISLSLEYHPAMLHQCGPGEVPPTIYLQ------------------------CAAGLPVEL---- 173
            ..::.:|              ||.:.::                        ..|.||.::    
plant   131 PANVVVE--------------PPNVVVEEKHRETVLALQSTRKPIITFQKRGRKASLPKKIDSKP 181

  Fly   174 ----------LKRFLCSKYNIETDNGLVEVEVTYKDEVLPTNFTLMDVAYCYNWSRESPMAFCYR 228
                      :|. |....|...||||.|.|.:...||:|....|     |      .|: |...
plant   182 EPELPPKEPKIKN-LFDLNNEPEDNGLDEAEGSTFQEVVPKEKDL-----C------KPI-FSLS 233

  Fly   229 ILLYDNEQTKNDENNLSRINQDI-EPEHSVRRSKSAKSVTFAEDLESEIDSGSPRSKVRCKTPPK 292
            :.|           |::....|| |||           ::..:|.|..::....:..|..:|...
plant   234 VTL-----------NINDTPPDIVEPE-----------ISSDDDTEESVEPIQNKCVVNRETKEV 276

  Fly   293 VSPSSKNKRLTSSKREAEPESPVSNFKSLRSNDMRYSDYAVSKVKSEPEQEQFLLPR-------- 349
            ....::|..|.||.|:.|..|.    :.|::|....|.....|.|...|:...|.||        
plant   277 PVQVNQNSLLISSDRDREDNSG----QKLKTNGAATSRSRKKKGKKPVEKSYSLRPRIGRRTVNP 337

  Fly   350 -------------EREQQPLEANTN--IVVSIPPSQLRKSYVDAEDFELKTANRKGVGHLPKLKI 399
                         |.|.:..|...|  :..|:.||              ||.|           |
plant   338 AAGTTTPEAPVSVEEEMKVEEGRNNNPVWFSLKPS--------------KTQN-----------I 377

  Fly   400 ELNSMKSKLSMPLSA-GPRLEDTSCSLSCSAQQLDLETYAKNIGLKPIEQ--------PLQQSAS 455
            |:      |..|::| ..|::|::.::|...:.|.::     :||:..:|        |:..|.:
plant   378 EM------LLPPITACCIRVKDSNMTVSYLKKYLMVK-----LGLESEDQVEIWLRDEPVCSSLT 431

  Fly   456 NPD-SKYSPNASPMSSCSSSTNGSSSS--------LGTADASTSTSTS 494
            ..: ..:....:|:....|:..|||::        ...:|||.|.|.|
plant   432 LHNLVDWWVQTTPLPERQSAMVGSSAAEFIMDLYYSFKSDASDSGSAS 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)2NP_001260933.1 zf-C3HC4 35..73 CDD:278524 16/39 (41%)
RAWUL 143..228 CDD:292824 22/122 (18%)
AT3G23060NP_188946.2 RING_Ubox 14..57 CDD:418438 16/42 (38%)
RING-HC finger (C3HC4-type) 16..56 CDD:319361 16/39 (41%)
RAWUL_DRIP_like 364..467 CDD:340607 25/138 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 52 1.000 Domainoid score I4257
eggNOG 1 0.900 - - E1_KOG2660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000290
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.770

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