DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Su(z)2 and PCGF2

DIOPT Version :9

Sequence 1:NP_001260933.1 Gene:Su(z)2 / 36432 FlyBaseID:FBgn0265623 Length:1396 Species:Drosophila melanogaster
Sequence 2:NP_001356543.1 Gene:PCGF2 / 7703 HGNCID:12929 Length:344 Species:Homo sapiens


Alignment Length:312 Identity:95/312 - (30%)
Similarity:146/312 - (46%) Gaps:45/312 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VRQFHDLITCRLCRGYMIDPTTVDYCYHTYCRSCILKHLLRAVYCPECKASGGKEINELNLKSDD 90
            :.:.:..:.|.||.||.||.||:..|.|::|::||:::|....|||.|.....|....|:::||.
Human     9 ITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDK 73

  Fly    91 TLRSLIYKLVPGLYQRECKELADFKEQHDLVD----------EQTTDEPEFFTTTELISLSLEYH 145
            ||:.::|||||||::.|.|...||...:.|.:          |....|....:..|::|||:|::
Human    74 TLQDIVYKLVPGLFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLEQEKGALSDDEIVSLSIEFY 138

  Fly   146 PAMLH--------QCGPGEVPPT--IYLQCAAGLPVELLKRFLCSKYNIETDNGLVEVEVTYKDE 200
            .....        :.|.|:...|  .:|:|.|.:.|..|.:||.:|.::.:.   .:|||.|:||
Human   139 EGARDRDEKKGPLENGDGDKEKTGVRFLRCPAAMTVMHLAKFLRNKMDVPSK---YKVEVLYEDE 200

  Fly   201 VLPTNFTLMDVAYCYNWSRESPMAFCYRI------LLYDNEQTKNDENNLSRINQDIEPEHSVRR 259
            .|...:||||:||.|.|.|..|:...||:      |......|.::..|.|..::.    .||  
Human   201 PLKEYYTLMDIAYIYPWRRNGPLPLKYRVQPACKRLTLATVPTPSEGTNTSGASEC----ESV-- 259

  Fly   260 SKSAKSVTFAEDLESEIDS------GSPRSKVRCKTPPKVSPSSKNKRLTSS 305
            |..|.|........|.:.|      |||.|    ..||...|:|.....|:|
Human   260 SDKAPSPATLPATSSSLPSPATPSHGSPSS----HGPPATHPTSPTPPSTAS 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)2NP_001260933.1 zf-C3HC4 35..73 CDD:278524 18/37 (49%)
RAWUL 143..228 CDD:292824 29/94 (31%)
PCGF2NP_001356543.1 RING-HC_PCGF4 12..65 CDD:319650 20/52 (38%)
RING-HC finger (C3HC4-type) 18..56 CDD:319650 18/37 (49%)
Nuclear localization signal. /evidence=ECO:0000255 81..95 8/13 (62%)
RAWUL_PCGF2 130..228 CDD:340684 32/100 (32%)
PLN02217 <236..328 CDD:215130 21/82 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..344 20/78 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157899
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000290
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10825
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.