DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)2 and Pcgf3

DIOPT Version :10

Sequence 1:NP_001260933.1 Gene:Su(z)2 / 36432 FlyBaseID:FBgn0265623 Length:1396 Species:Drosophila melanogaster
Sequence 2:NP_001363929.1 Gene:Pcgf3 / 69587 MGIID:1916837 Length:259 Species:Mus musculus


Alignment Length:236 Identity:62/236 - (26%)
Similarity:110/236 - (46%) Gaps:52/236 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ITCRLCRGYMIDPTTVDYCYHTYCRSCILKHLLRAVYCPECKASGGKEINELNLKSDDTLRSLIY 97
            ||||||.||:||.|||..|.||:||||::|:|.....||.|:....:......:..|.|::.::|
Mouse    15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTMQDIVY 79

  Fly    98 KLVPGLYQRECKELADF------------------KEQH----------------DLVDEQTTDE 128
            ||||||.:.|.::..:|                  .:||                :..:|:..::
Mouse    80 KLVPGLQEAEMRKQREFYHKLGMEVPGDIKGEACSAKQHLDPRNGETKADDNSNKETAEEKQEED 144

  Fly   129 PEFFTTTELISLSLEYHPAMLHQCGPGEVPPTIYLQCAAGLPVELLKRFLCSKYNIETDNGLVEV 193
            .::..:.|.:|:.||.:.:.|...      ...:::|:|...|..||:|:..|.|:.:.|   |:
Mouse   145 NDYHRSDEQVSICLECNSSKLRGL------KRKWIRCSAQATVLHLKKFIAKKLNLSSFN---EL 200

  Fly   194 EVTYKDEVLPTNFTLMDVAYCYNWSRESPMAFCYRILLYDN 234
            ::...:|:|..:.||..|... .|.        ::.||:::
Mouse   201 DILCNEEILGKDHTLKFVVVT-RWR--------FKTLLWNS 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)2NP_001260933.1 RING-HC_PCGF5 23..117 CDD:438395 36/101 (36%)
RAWUL_PCGF2_like 137..228 CDD:340602 20/90 (22%)
Pcgf3NP_001363929.1 RING-HC_PCGF3 4..69 CDD:438393 25/53 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..148 3/32 (9%)
RAWUL_PCGF3 153..226 CDD:340603 20/90 (22%)

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