DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)2 and RNF2

DIOPT Version :10

Sequence 1:NP_001260933.1 Gene:Su(z)2 / 36432 FlyBaseID:FBgn0265623 Length:1396 Species:Drosophila melanogaster
Sequence 2:NP_009143.1 Gene:RNF2 / 6045 HGNCID:10061 Length:336 Species:Homo sapiens


Alignment Length:367 Identity:69/367 - (18%)
Similarity:124/367 - (33%) Gaps:115/367 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LQNTHNTMESNAAMDAASPASRDVRQFHDLITCRLCRGYMIDPTTVDYCYHTYCRSCILKHLLRA 67
            ||.|.....::......||     |..|..:.|.:|...:.:..|...|.|.:|..||:..|...
Human    24 LQRTPQEAITDGLEIVVSP-----RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSG 83

  Fly    68 -VYCPECKASGGKEINELNLKSDDTLRSLIYKLVPGLYQRECKELADFKEQHDLVDEQTTDEPEF 131
             ..||.|:.   |.:::.:|:.|....:||.|:.|.            :::::...|:.......
Human    84 NKECPTCRK---KLVSKRSLRPDPNFDALISKIYPS------------RDEYEAHQERVLARINK 133

  Fly   132 FTTTELISLSLEYHPAMLHQCGPGEVPPTIYLQCAAGLPVELLKRF-LCSKYNIET-----DNGL 190
            ....:.:|.|:|                       .||.::.:.|. ...|..||.     ||| 
Human   134 HNNQQALSHSIE-----------------------EGLKIQAMNRLQRGKKQQIENGSGAEDNG- 174

  Fly   191 VEVEVTYKDEVLPTNFTLMDVAYCYNWSRES-----PMAFCYRILLYDNEQTK-NDENNLSRINQ 249
                               |.::|.|.|..|     |          .|::|| :|::.|...| 
Human   175 -------------------DSSHCSNASTHSNQEAGP----------SNKRTKTSDDSGLELDN- 209

  Fly   250 DIEPEHSVRRSKSAKSVTFAEDLESEIDSGSPRSKVRCKTPPKV--SPSSKNKRLTSSKREAEPE 312
                      :.:|.::....|..|||:       :..:..|.:  ...|...|...:...|..:
Human   210 ----------NNAAMAIDPVMDGASEIE-------LVFRPHPTLMEKDDSAQTRYIKTSGNATVD 257

  Fly   313 SPVSNFKSLRSNDMRYSDYAVSKVKSEPEQEQFLLPREREQQ 354
            . :|.:.::|        .|:.:::|:.|..|..|....|:|
Human   258 H-LSKYLAVR--------LALEELRSKGESNQMNLDTASEKQ 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)2NP_001260933.1 RING-HC_PCGF5 23..117 CDD:438395 21/94 (22%)
RAWUL_PCGF2_like 137..228 CDD:340602 18/101 (18%)
RNF2NP_009143.1 Interaction with HIP2. /evidence=ECO:0000269|PubMed:11513855 2..179 40/217 (18%)
RING-HC_RING2 37..113 CDD:438398 21/83 (25%)
Interaction with nucleosomes via an acidic patch on histone H2A and histone H2B. /evidence=ECO:0000269|PubMed:25355358 93..98 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..208 17/80 (21%)
RAWUL_RING2 225..330 CDD:340687 15/82 (18%)

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