DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)2 and bmi1

DIOPT Version :9

Sequence 1:NP_001260933.1 Gene:Su(z)2 / 36432 FlyBaseID:FBgn0265623 Length:1396 Species:Drosophila melanogaster
Sequence 2:NP_001015995.1 Gene:bmi1 / 548749 XenbaseID:XB-GENE-942188 Length:325 Species:Xenopus tropicalis


Alignment Length:318 Identity:95/318 - (29%)
Similarity:156/318 - (49%) Gaps:43/318 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VRQFHDLITCRLCRGYMIDPTTVDYCYHTYCRSCILKHLLRAVYCPECKASGGKEINELNLKSDD 90
            :.:.:..:.|.||.||.||.||:..|.|::|::||:::|..:.|||.|.....|....||:::|.
 Frog     9 ITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRADK 73

  Fly    91 TLRSLIYKLVPGLYQRECKELADFKEQHDLVD----------EQTTDEPEFFTTTELISLSLEYH 145
            ||:.::|||||||::.|.|...||...|...|          |...::....|..|:||||:|:.
 Frog    74 TLQDIVYKLVPGLFKGEMKRRRDFYAAHPSADASNGSNEDRGEVADEDKRIITDDEIISLSIEFF 138

  Fly   146 P--------AMLHQCGPGEVPPTIYLQCAAGLPVELLKRFLCSKYNIETDNGLVEVEVTYKDEVL 202
            .        :...:....|.....||:|.|.|.|..|::||.||.:|.::   .:::|.|::|.|
 Frog   139 DQNRADRKGSKDKEKSKEEANDKRYLRCPAALTVMHLRKFLRSKMDIPSN---FQIDVMYEEEPL 200

  Fly   203 PTNFTLMDVAYCYNWSRESPMAFCYRI-----LLYDNEQTKNDENNLSRINQDIEPEHSVRRSKS 262
            ...:||||:||.|.|.|..|:...||:     .:..|..|    :.::..:.|:|.:     |.|
 Frog   201 KDYYTLMDIAYIYTWRRNGPLPLKYRVRPTCKRMKINPHT----DRITNTSGDMESD-----SGS 256

  Fly   263 AKSVTFAEDLESEID-SGSPRSKVRCKTP--PKVSPSSKNKRLTSSKREAEPESPVSN 317
            .|:.:....:.|... ..||.:.|:...|  |.:| |:.|...:||..    ::|.:|
 Frog   257 DKAGSLGGGMPSTSSCMPSPSTPVQSPHPQFPHIS-STMNGTSSSSSH----QNPFAN 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)2NP_001260933.1 zf-C3HC4 35..73 CDD:278524 18/37 (49%)
RAWUL 143..228 CDD:292824 28/92 (30%)
bmi1NP_001015995.1 zf-C3HC4 18..56 CDD:278524 18/37 (49%)
RAWUL 144..226 CDD:292824 27/84 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000290
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10825
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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