DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)2 and Rnf2

DIOPT Version :10

Sequence 1:NP_001260933.1 Gene:Su(z)2 / 36432 FlyBaseID:FBgn0265623 Length:1396 Species:Drosophila melanogaster
Sequence 2:NP_035407.1 Gene:Rnf2 / 19821 MGIID:1101759 Length:336 Species:Mus musculus


Alignment Length:373 Identity:67/373 - (17%)
Similarity:122/373 - (32%) Gaps:127/373 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LQNTHNTMESNAAMDAASPASRDVRQFHDLITCRLCRGYMIDPTTVDYCYHTYCRSCILKHLLRA 67
            ||.|.....::......||     |..|..:.|.:|...:.:..|...|.|.:|..||:..|...
Mouse    24 LQRTPQEAITDGLEIVVSP-----RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSG 83

  Fly    68 -VYCPECKASGGKEINELNLKSDDTLRSLIYKLVPGLYQRECKELADFKEQHDLVDEQTTDEPEF 131
             ..||.|:.   |.:::.:|:.|....:||.|:.|.            :::::...|:.......
Mouse    84 NKECPTCRK---KLVSKRSLRPDPNFDALISKIYPS------------RDEYEAHQERVLARINK 133

  Fly   132 FTTTELISLSLEYHPAMLHQCGPGEVPPTIYLQCAAGLPVELLKRF-LCSKYNIET-----DNGL 190
            ....:.:|.|:|                       .||.::.:.|. ...|..||.     ||| 
Mouse   134 HNNQQALSHSIE-----------------------EGLKIQAMNRLQRGKKQQIENGSGAEDNG- 174

  Fly   191 VEVEVTYKDEVLPTNFTLMDVAYCYNWSRESPMAFCYRILLYDNEQTKNDENNLSRINQDIEPEH 255
                               |.::|.|.|..|                          ||:..|  
Mouse   175 -------------------DSSHCSNASTHS--------------------------NQEAGP-- 192

  Fly   256 SVRRSKSAKSVTFAEDLESEIDS------------GSPRSKVRCKTPPKV--SPSSKNKRLTSSK 306
            |.:|:|:      ::|...|:|:            |:...::..:..|.:  ...|...|...:.
Mouse   193 SNKRTKT------SDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQTRYIKTS 251

  Fly   307 REAEPESPVSNFKSLRSNDMRYSDYAVSKVKSEPEQEQFLLPREREQQ 354
            ..|..:. :|.:.::|        .|:.:::|:.|..|..|....|:|
Mouse   252 GNATVDH-LSKYLAVR--------LALEELRSKGESNQMNLDTASEKQ 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)2NP_001260933.1 RING-HC_PCGF5 23..117 CDD:438395 21/94 (22%)
RAWUL_PCGF2_like 137..228 CDD:340602 17/96 (18%)
Rnf2NP_035407.1 Interaction with HIP2. /evidence=ECO:0000250|UniProtKB:Q99496 2..179 40/217 (18%)
RING-HC_RING2 37..113 CDD:438398 21/83 (25%)
Interaction with nucleosomes via an acidic patch on histone H2A and histone H2B. /evidence=ECO:0000250|UniProtKB:Q99496 93..98 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..206 18/102 (18%)
RAWUL_RING2 225..330 CDD:340687 13/75 (17%)

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