DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)2 and l(3)73Ah

DIOPT Version :10

Sequence 1:NP_001260933.1 Gene:Su(z)2 / 36432 FlyBaseID:FBgn0265623 Length:1396 Species:Drosophila melanogaster
Sequence 2:XP_312405.2 Gene:l(3)73Ah / 1273429 VectorBaseID:AGAMI1_007872 Length:222 Species:Anopheles gambiae


Alignment Length:226 Identity:65/226 - (28%)
Similarity:110/226 - (48%) Gaps:38/226 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VRQFHDLITCRLCRGYMIDPTTVDYCYHTYCRSCILKHLLRAVYCPECKASGGKEINELN----L 86
            ::..::.|||.:||||.||.|||..|.||:|:||::|||.....||.|:    ..|::.:    :
Mosquito     7 LKTLNEHITCEICRGYFIDATTVTECLHTFCKSCLVKHLEENNTCPTCE----NVIHQSHPLQYI 67

  Fly    87 KSDDTLRSLIYKLVPGL----YQRE----------C-KELADFKEQHDLVDEQTTDEPEFFTTTE 136
            ..|.|::.::|||||.|    .|||          | |::....:..|..:||...|.::....|
Mosquito    68 SFDRTMQDIVYKLVPNLMDNEMQREREFYKSRNLPCPKDMPQVHDSDDKANEQAHQEADYHRQDE 132

  Fly   137 LISLSLEYHPAMLHQCGPGEVPPTIYLQCAAGLPVELLKRFLCSKYNIETDNGL---VEVEVTYK 198
            .:::.||.....|...      ...:::|::.:.:..||:||..|    ..||:   .::::...
Mosquito   133 QVNVCLECISDKLRNL------KRRFIRCSSQITITHLKKFLAKK----VLNGIDRYKDIDILCN 187

  Fly   199 DEVLPTNFTLMDVAYCYNWS-RESPMAFCYR 228
            ||:|..:.||..| |...|. ::.|:...||
Mosquito   188 DELLGKDHTLKFV-YVTRWRFKDPPLRLQYR 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)2NP_001260933.1 RING-HC_PCGF5 23..117 CDD:438395 38/109 (35%)
RAWUL_PCGF2_like 137..228 CDD:340602 20/94 (21%)
l(3)73AhXP_312405.2 RING-HC_PCGF3 3..68 CDD:438393 25/64 (39%)
RAWUL_PCGF3 133..217 CDD:340603 20/94 (21%)

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