DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)2 and pcgf6

DIOPT Version :10

Sequence 1:NP_001260933.1 Gene:Su(z)2 / 36432 FlyBaseID:FBgn0265623 Length:1396 Species:Drosophila melanogaster
Sequence 2:XP_002936851.2 Gene:pcgf6 / 100489850 XenbaseID:XB-GENE-6258271 Length:295 Species:Xenopus tropicalis


Alignment Length:197 Identity:59/197 - (29%)
Similarity:99/197 - (50%) Gaps:24/197 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ITCRLCRGYMIDPTTVDYCYHTYCRSCILKHLLRAVYCPECKASGGKEINELNLKSDDTLRSLIY 97
            |.|.:|:||:||.||:..|.||:|:|||:||......||:|.....:.....|::.|..|:.:::
 Frog    77 ILCSICKGYLIDATTITECLHTFCKSCIVKHFYYTNRCPKCNIVVHQTQPLYNIRLDRQLQDIVF 141

  Fly    98 KLVPGLYQRECKEL-ADFKE------QHDL--------VDEQTTDEPEFFTTTEL-ISLSLEYHP 146
            |||..|.|||..:: |.:||      :|::        ..::.|.||.|....|| :||.||:..
 Frog   142 KLVVDLEQREKNQMYAFYK
ERGLDVPKHNVPQPISSSRAKQKKTIEPVFRIPPELDVSLLLEFMG 206

  Fly   147 AMLHQCGPGEVPP--TIYLQCAAGLPVELLKRFLCSKYNIETDNGLVEVEVTYKDEVLPTNFTLM 209
            |   :.|.|...|  ..|::.:....:..:::||..|..:.|   ..:|::...|.:|....||.
 Frog   207 A---EKGTGSFKPLEKKYVRVSGEATIGHVEKFLRRKMELNT---TCQVDIICGDHLLEHFQTLK 265

  Fly   210 DV 211
            ::
 Frog   266 EI 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)2NP_001260933.1 RING-HC_PCGF5 23..117 CDD:438395 34/90 (38%)
RAWUL_PCGF2_like 137..228 CDD:340602 19/78 (24%)
pcgf6XP_002936851.2 RING_Ubox 70..160 CDD:473075 32/82 (39%)
RAWUL_PCGF6 197..279 CDD:340605 18/77 (23%)

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