Protein Alignment Psc and pcgf6

DIOPT Version :10

• Sequence 1: NP_523725.2
• Gene: Psc / 36431
• FlyBaseID: FBgn0005624
• Length: 1601
• Species: Drosophila melanogaster
• Sequence 2: NP_001082838.1
• Gene: pcgf6 / 555238
• ZFINID: ZDB-GENE-060526-178
• Length: 277
• Species: Danio rerio
• Alignment Length: 299
• Identity: 87/299 - (29%)
• Similarity: 137/299 - (45%)
• Gaps: 69/299 - (23%)

  Fly   170 ESTPPAVESVEASSSSSSSSSSSSSSSSSWPTTRRATSEDASSNGGASADEEKSEEDPTAAVAAS 234
            |:...|||..|.|:..|..|.:..|..          .|...::|   |.:::::::|
Zfish     3 ETVDRAVEEREGSTRWSVRSGAYLSGE----------DETRDTHG---APKQQADDEP------- 47

  Fly   235 STATTTSDLATTSRPRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRKERFCP 299
                        |.|    |....|:|.|.||.|:.|:||||.||||:||.||::.|......||
Zfish    48 ------------SLP----LRDFYPYIRCALCNGFFIDATTITECLHTFCKSCIVKHFFYSNRCP 96

  Fly   300 RCEMVINNAKP--NIKSDTTLQAIVYKLVPGLYERELMRKRAFYK------DRPEEAALATP--- 353
            .|.:|::..:|  .|:.|..||.||:|:||.|.|.|..|..|||:      .:|..:..|.|
Zfish    97 NCSIVVHQTQPLYCIRPDRQLQDIVFKMVPYLEEDERSRICAFYRLRGLEVPKPVASPAAYPVKL 161

  Fly   354 --EQRGDDTEHLIFS-PSD-DMSLSLEY--AELGELKTDSEPELVDTLRP---RYLQCPAMCRVS 409
              .|:.|.....:|: ||: |:||.||:  ||.|          |:..:|   :|::......|.
Zfish   162 PQRQKKDLVPQSVFTIPSELDVSLMLEFVGAEKG----------VENYKPLERKYVRVSGEATVR 216

  Fly   410 HLKKFVYDKFEIDAQRFSIDIMYKVKTIVLLDYYTLMDI 448
            |::.|:..|.|: :|...:|::  ....:|..|.:|.:|
Zfish   217 HVELFIRRKMEL-SQNCKVDVV--CGEHILEQYQSLREI 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Psc	NP_523725.2	RING_Ubox	254..341	CDD:473075	40/88 (45%)
		RAWUL_PCGF2_like	371..465	CDD:340602	21/83 (25%)
		PHA03247	<1160..1381	CDD:223021
pcgf6	NP_001082838.1	RING-HC_PCGF6	51..109	CDD:438396	26/57 (46%)
		RAWUL_PCGF6	182..271	CDD:340605	22/84 (26%)