Protein Alignment Psc and rnf2

DIOPT Version :10

• Sequence 1: NP_523725.2
• Gene: Psc / 36431
• FlyBaseID: FBgn0005624
• Length: 1601
• Species: Drosophila melanogaster
• Sequence 2: NP_998872.1
• Gene: rnf2 / 407872
• XenbaseID: XB-GENE-981241
• Length: 336
• Species: Xenopus tropicalis
• Alignment Length: 305
• Identity: 63/305 - (20%)
• Similarity: 110/305 - (36%)
• Gaps: 88/305 - (28%)

  Fly   240 TSDLATTSRPRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEM 303
            |..|.....||     :::..::|.:|...|.|..|..||||.||..|:|..||. .:.||.|..
 Frog    33 TDGLEIVVSPR-----SLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRK 92

  Fly   304 VINNAKPNIKSDTTLQAIVYKLVPGLYERELMRKRAFYK-------------------------- 342
            .: .:|.:::.|....|::.|:.|...|.|..::|...:
 Frog    93 KL-VSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQALNRL 156

  Fly   343 ---DRPE-----------------EAALATPEQRGDDTEHLIFSPSDDMSLSL----EYAELGE- 382
               .:|:                 .|::.:.::.|...:..  ..|||..|.|    |.|.:..
 Frog   157 PRGKKPQVENGSGAEDNADSSHCSNASVHSNQEAGPSNKRT--KTSDDSGLELDTNNETASMDSV 219

  Fly   383 LKTDSEPELV-----------DTLRPRYLQCPAMCRVSHLKKFVYDKFEIDAQR-------FSID 429
            |...||.|||           |:.:.||::......|.||.|::..:..::..|       .|::
 Frog   220 LDGASEIELVFRPHPTLMEKDDSAQTRYIKTSGNATVDHLSKYLAVRLALEEFRSKGENNQMSLN 284

  Fly   430 I----MYKVKTIVLLDYYTLMDIAYIYT------WKRDAPMRFYY 464
            .    .|.:........:|:::.::...      ||.:.||..||
 Frog   285 AASEKQYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYY 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Psc	NP_523725.2	RING_Ubox	254..341	CDD:473075	26/87 (30%)
		RAWUL_PCGF2_like	371..465	CDD:340602	27/127 (21%)
		PHA03247	<1160..1381	CDD:223021
rnf2	NP_998872.1	RING-HC_RING2	37..113	CDD:438398	23/81 (28%)
		RAWUL_RING2	225..330	CDD:340687	21/105 (20%)