Protein Alignment Psc and rnf2

DIOPT Version :10

• Sequence 1: NP_523725.2
• Gene: Psc / 36431
• FlyBaseID: FBgn0005624
• Length: 1601
• Species: Drosophila melanogaster
• Sequence 2: NP_571288.2
• Gene: rnf2 / 327035
• ZFINID: ZDB-GENE-030131-5243
• Length: 338
• Species: Danio rerio
• Alignment Length: 303
• Identity: 67/303 - (22%)
• Similarity: 111/303 - (36%)
• Gaps: 84/303 - (27%)

  Fly   240 TSDLATTSRPRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEM 303
            |..|.....||     :::..::|.:|...|.|..|..||||.||..|:|..||. .:.||.|..
Zfish    35 TDGLEIAVSPR-----SLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRK 94

  Fly   304 VINNAKPNIKSDTTLQAIVYKLVPGLYERELMRKRA---FYKDRPEEAALATPE----------- 354
            .: .:|.:::.|....|::.|:.|...|.|..::|.   ..|...::|...:.|
Zfish    95 KL-VSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRL 158

  Fly   355 QRG--------------DDTEHL----IFS------------PSDDMSLSLEYAEL---GELKTD 386
            |||              .|:.|.    :.|            .|||..|.::.|..   |::..|
Zfish   159 QRGKKHQIENGSGAEDNGDSSHCSNASVHSNQEAGPSIKRTKTSDDSGLDMDNATENGGGDIALD 223

  Fly   387 --SEPELV-----------DTLRPRYLQCPAMCRVSHLKKFVYDKFEIDAQR------------- 425
              ||.|||           |..:.||::......|.||.|::..:..::..|
Zfish   224 GVSEIELVFRPHPTLMEKEDAAQTRYIKTSGNATVDHLSKYLAVRLALEEMRKNGEASPINVEAA 288

  Fly   426 ----FSIDIMYKVKTIVLLDYYTLMDIAYIYTWKRDAPMRFYY 464
                ::|.|........:|:....:::.....||.:.||..|:
Zfish   289 SEKQYTIYIPTASNQFTVLNGSFSLELVSEKYWKVNKPMELYF 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Psc	NP_523725.2	RING_Ubox	254..341	CDD:473075	26/90 (29%)
		RAWUL_PCGF2_like	371..465	CDD:340602	25/127 (20%)
		PHA03247	<1160..1381	CDD:223021
rnf2	NP_571288.2	RING-HC_RING2	39..115	CDD:438398	23/81 (28%)
		RAWUL_RING2	227..332	CDD:340687	20/105 (19%)