Protein Alignment Psc and Rnf2

DIOPT Version :9

• Sequence 1: NP_001286368.1
• Gene: Psc / 36431
• FlyBaseID: FBgn0005624
• Length: 1601
• Species: Drosophila melanogaster
• Sequence 2: XP_006250052.1
• Gene: Rnf2 / 304850
• RGDID: 1305491
• Length: 336
• Species: Rattus norvegicus
• Alignment Length: 303
• Identity: 64/303 - (21%)
• Similarity: 109/303 - (35%)
• Gaps: 84/303 - (27%)

  Fly   240 TSDLATTSRPRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEM 303
            |..|.....||     :::..::|.:|...|.|..|..||||.||..|:|..||. .:.||.|..
  Rat    33 TDGLEIVVSPR-----SLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRK 92

  Fly   304 VINNAKPNIKSDTTLQAIVYKLVPGLYERELMRKRA---FYKDRPEEAALATPE----------- 354
            .: .:|.:::.|....|::.|:.|...|.|..::|.   ..|...::|...:.|
  Rat    93 KL-VSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAMNRL 156

  Fly   355 QRG--------------DDTEHLI----------------FSPSDDMSLSLEYAELG-----ELK 384
            |||              .|:.|..                ...|||..|.|:.....     .:.
  Rat   157 QRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNAAVAIDPVMD 221

  Fly   385 TDSEPELV-----------DTLRPRYLQCPAMCRVSHLKKFVYDKFEI-------DAQRFSIDI- 430
            ..||.|||           |:.:.||::......|.||.|::..:..:       ::.:.::|.
  Rat   222 GASEIELVFRPHPTLMEKDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTA 286

  Fly   431 ---MYKVKTIVLLDYYTLMDIAYIYT------WKRDAPMRFYY 464
               .|.:........:|:::.::...      ||.:.||..||
  Rat   287 SEKQYTIYIATASGQFTVLNGSFSLELVSEKYWKVNKPMELYY 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Psc	NP_001286368.1	zf-C3HC4	263..301	CDD:278524	17/38 (45%)
		RAWUL	384..465	CDD:292824	21/109 (19%)
Rnf2	XP_006250052.1	COG5222	<11..>103	CDD:227547	23/75 (31%)
		RING-HC_RING1_like	51..91	CDD:319445	17/39 (44%)
		RAWUL_RING2	225..330	CDD:340687	20/105 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166351892
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840