Protein Alignment Psc and Pcgf2

DIOPT Version :9

• Sequence 1: NP_001286368.1
• Gene: Psc / 36431
• FlyBaseID: FBgn0005624
• Length: 1601
• Species: Drosophila melanogaster
• Sequence 2: NP_001099306.1
• Gene: Pcgf2 / 287662
• RGDID: 1305097
• Length: 342
• Species: Rattus norvegicus
• Alignment Length: 430
• Identity: 131/430 - (30%)
• Similarity: 197/430 - (45%)
• Gaps: 103/430 - (23%)

  Fly   248 RPRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRKERFCPRCEMVINNAKP-- 310
            |...:.:|.:|||::|.||.||.|:||||||||||||.:|::.:|...::||.|::.::..:|
  Rat     3 RTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLL 67

  Fly   311 NIKSDTTLQAIVYKLVPGLYERELMRKRAFYKDRP-EEAALATPEQRGDDTEHLIFSPSDD--MS 372
            :|:||.|||.|||||||||::.|:.|:|.||...| .|....:.|.||:..|....:..||  :|
  Rat    68 SIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLEQEKGALGDDEIVS 132

  Fly   373 LSLEYAELGELKTDSEPELVDT-------LRPRYLQCPAMCRVSHLKKFVYDKFEIDAQRFSIDI 430
            ||:|:.| |....:.:..||:.       ...|:|:|||...|.||.||:.:|.::.: ::.::|
  Rat   133 LSIEFYE-GVRDREEKKSLVENGDGDKEKTGVRFLRCPAAMTVMHLAKFLRNKMDVPS-KYKVEI 195

  Fly   431 MYKVKTIVLLDYYTLMDIAYIYTWKRDAPMRFYYRVYESPQPLVKPAPRRVLPLKLEKQERENQE 495
            :|:.:.  |.:|||||||||||.|:|:.|:...|||    ||..|   |..||
  Rat   196 LYEDEP--LKEYYTLMDIAYIYPWRRNGPLPLKYRV----QPACK---RLTLP------------ 239

  Fly   496 QQLAVEVASSKVEPVSLPEDQKAEASIKVEEQESTREIVKEVIKDVAATPPTETLKLVINRNMLD 560
                           ::|...:...:....|.||        :.|.|.:|.|
  Rat   240 ---------------TVPTPSEGTNTSGASECES--------VSDKAPSPAT------------- 268

  Fly   561 KREKSHSPQMSSKSSSKSSPCTPV-SSPSEPNIKLKIDLSKQNSVTIIDMSDPERREIVKPLKPE 624
                     :.:.|||..||.||. .|||.                    ..|.......|..|.
  Rat   269 ---------LPATSSSLPSPATPSHGSPSS--------------------HGPPATHPTSPTPPS 304

  Fly   625 KESRSKKKDKDGSPKSSSSSSSSSSGERKRKSPSPLTVPP 664
            ..:.:......|:.....:.||:|.|.:...:.:|  .||
  Rat   305 TAAGTTTATNGGTSNCLQTPSSTSRGRKMTVNGAP--CPP 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Psc	NP_001286368.1	zf-C3HC4	263..301	CDD:278524	22/37 (59%)
		RAWUL	384..465	CDD:292824	30/87 (34%)
Pcgf2	NP_001099306.1	RING-HC_PCGF4	12..65	CDD:319650	26/52 (50%)
		RAWUL_PCGF2	130..228	CDD:340684	36/101 (36%)
		PHA03247	<222..304	CDD:223021	30/165 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166351896
Domainoid	1	1.000	76	1.000	Domainoid score	I8748
eggNOG	1	0.900	-	-		E1_KOG2660
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000290
OrthoInspector	1	1.000	-	-		otm45886
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR10825
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	9	8.800