Sequence 1: | NP_001286368.1 | Gene: | Psc / 36431 | FlyBaseID: | FBgn0005624 | Length: | 1601 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001024904.2 | Gene: | spat-3 / 259704 | WormBaseID: | WBGene00020496 | Length: | 2476 | Species: | Caenorhabditis elegans |
Alignment Length: | 1971 | Identity: | 388/1971 - (19%) |
---|---|---|---|
Similarity: | 607/1971 - (30%) | Gaps: | 675/1971 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 34 KSQLSTLAKTTTTTATNKAAKSVVSNANSSGNNSSKKLALSQSQKTTTTTTPPTTTTTTTAAAAA 98
Fly 99 EATTNADKMQKQQQLK-----QQLFA----ACSIKVKSENTLATT-----ANAA--LAAATTTTT 147
Fly 148 TATPALATGKAAKTILEN---------------------GIKKESTPPAVESVEASSSSSSSSSS 191
Fly 192 SSSSSSSWPTTRR----ATSED------------------ASSNGGASAD-EEKSEEDPTAAVAA 233
Fly 234 SSTATTTSDLATTSRPRPVLLTAVNPHIICHLCQGYLINA--TTIVECLHSFCHSCLINHLRKER 296
Fly 297 FCPRCEMVINNAKPNIKSDTTLQAIVYKLVPGLYERELMRKRAFYKDRPEEAALATPEQ-RGDDT 360
Fly 361 EHLIFSPSDDMSLSLEYAELG------------ELKTDSEPELVDTLRPRYLQCPAMCRVSHLKK 413
Fly 414 FVYDKFEIDAQRFSID-----------IMYKVKTIVLLDYY---------TLMDIAYIYTWKRDA 458
Fly 459 PMRFYYRVYESPQPLVKPAPRRVLPL----KLEKQERENQEQQL---------AVEVASSKVEP- 509
Fly 510 VSLPEDQKAEASIKVEEQESTREIVKEVIKDVAATPPTETLKLVINRNMLDKREKSHSPQMSSKS 574
Fly 575 SSKS-------SPCTPVSSPSEPNIKLKIDLSKQNSVTIID------------MSDPERREIVKP 620
Fly 621 L--KPEKESRSKKKDKDG-------SPKSSSSSSSSSSGERKRKSPSPLTVPPLTIRTERIMSPS 676
Fly 677 G-----------VSTLSPRVTSGAFSEDPKSEFLKSFALKPIKVKVESPERTLNNRAITPPSPSV 730
Fly 731 --------QQSASPKSKGNNLDDSILMKPPSCMPPKSIASSKRKSKEPVKAVSKKQKLSPPLPT- 786
Fly 787 -----------------VD-----FKIRLPVTNGNSSGTASPKIEKPLMPPPAK----------- 818
Fly 819 --PPMLAPRKLQPSAQFAPPPSPIHHHAGVQMSAPGNRTPIAKRYQPILPKASRPNPFANI---- 877
Fly 878 -----PNDVNRLLKDAGTEIKSIGGGSVENNSNA----AQKPHLY-----GPKGESKMGPPALPA 928
Fly 929 TTPSQGNKNVGKQAGNLPM-----SAPPNKGNSSNNYLNLALFNSSKCKGKEAPPGCRTPMYTPN 988
Fly 989 SPIYSPSSPQYVPSYNIPTMPTYKYTPKPTPNSGSGNGGSGSYLQNMLGGGNGGSLGGLFPSPPT 1053
Fly 1054 KSDQNTNPAQGGGGSSSA-------TQSGGNNGIVNNNIYMPNEDAPEKQQVKVKSLLNSCNINI 1111
Fly 1112 PSSLSI------------TISRDNG------DSSSPN-----------------NGQHP------ 1135
Fly 1136 --------------------------KHKSPV--NNYIEIV--------------------KLPD 1152
Fly 1153 QPQ---DQVQAAKEAQK-RQSPPAA-------------VPGHLAAKLP--------------PPP 1186
Fly 1187 PSK-------------------AIPSPQHLVSRMTPPQLP--KVATPPPPSSPRVITPPKTSPPA 1230
Fly 1231 NAAKVTP--------------LKPVLTPTQVDKKTPSPEKRTA-------------------AQM 1262
Fly 1263 GSHSP----------TASENKSPKGGPAGVANSTGGAQNGDPAAKKFRPILPRQNGMPELAPKLP 1317
Fly 1318 TLAPFVGFNPLQNPAAGKKVPPSKKSPNAGAAAHQSGQQKLVNGGQSQPAQQ------KTSPPAQ 1376
Fly 1377 KNQQQVKKVSKNPTPPPPSLPAVGKMM-PHPVMHSQNAPLSIASSAS----------AAAVASGQ 1430
Fly 1431 LDLSNFLKENLRRVHAAQAAQAAQVAAAANQSNMMYNLAQMGHMTPAMYNYQQAYFREQLSRMQR 1495
Fly 1496 VGNEVFNDYLQKLKTAAATGGGGPVEGELKPMLPTVTLPSPGATPPAASPKTSPLPAGKLTAAAT 1560
Fly 1561 -APQTKGNSSSGAANARQQTA 1580 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Psc | NP_001286368.1 | zf-C3HC4 | 263..301 | CDD:278524 | 7/39 (18%) |
RAWUL | 384..465 | CDD:292824 | 20/100 (20%) | ||
spat-3 | NP_001024904.2 | RING-HC_RNF138 | 158..203 | CDD:319458 | |
MSCRAMM_SdrD | <290..583 | CDD:380149 | 46/215 (21%) | ||
GREB1 | <1301..>1430 | CDD:374106 | 32/171 (19%) | ||
PAT1 | <1724..>1845 | CDD:370676 | 29/125 (23%) | ||
DUF1720 | 2150..>2199 | CDD:369766 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 108 | 1.000 | Inparanoid score | I3489 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.960 |