Protein Alignment Psc and Rnf2

DIOPT Version :9

• Sequence 1: NP_001286368.1
• Gene: Psc / 36431
• FlyBaseID: FBgn0005624
• Length: 1601
• Species: Drosophila melanogaster
• Sequence 2: NP_001347773.1
• Gene: Rnf2 / 19821
• MGIID: 1101759
• Length: 345
• Species: Mus musculus
• Alignment Length: 345
• Identity: 70/345 - (20%)
• Similarity: 121/345 - (35%)
• Gaps: 98/345 - (28%)

  Fly   204 RATSEDASSNGGASADEE------KSEEDPTAAVAASSTATTTSDLATTSRPRPVLLTAVNPHII 262
            |..|:...:||.....:.      :.:..|..|:        |..|.....||     :::..::
Mouse     8 REMSQAVQTNGTQPLSKTWELSLYELQRTPQEAI--------TDGLEIVVSPR-----SLHSELM 59

  Fly   263 CHLCQGYLINATTIVECLHSFCHSCLINHLRK-ERFCPRCEMVINNAKPNIKSDTTLQAIVYKLV 326
            |.:|...|.|..|..||||.||..|:|..||. .:.||.|...: .:|.:::.|....|::.|:.
Mouse    60 CPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDALISKIY 123

  Fly   327 PGLYERELMRKRA---FYKDRPEEAALATPE-----------QRG--------------DDTEHL 363
            |...|.|..::|.   ..|...::|...:.|           |||              .|:.|.
Mouse   124 PSRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHC 188

  Fly   364 I----------------FSPSDDMSLSLEYAELG-----ELKTDSEPELV-----------DTLR 396
            .                ...|||..|.|:.....     .:...||.|||           |:.:
Mouse   189 SNASTHSNQEAGPSNKRTKTSDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQ 253

  Fly   397 PRYLQCPAMCRVSHLKKFVYDKFEI-------DAQRFSIDI----MYKVKTIVLLDYYTLMDIAY 450
            .||::......|.||.|::..:..:       ::.:.::|.    .|.:........:|:::.::
Mouse   254 TRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNGSF 318

  Fly   451 IYT------WKRDAPMRFYY 464
            ...      ||.:.||..||
Mouse   319 SLELVSEKYWKVNKPMELYY 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Psc	NP_001286368.1	zf-C3HC4	263..301	CDD:278524	17/38 (45%)
		RAWUL	384..465	CDD:292824	21/109 (19%)
Rnf2	NP_001347773.1	RING-HC_RING2	56..102	CDD:319654	18/45 (40%)
		RING-HC finger (C3HC4-type)	60..99	CDD:319654	17/38 (45%)
		RAWUL_RING2	234..339	CDD:340687	20/105 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167848280
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840