Protein Alignment Psc and mig-32

DIOPT Version :9

• Sequence 1: NP_001286368.1
• Gene: Psc / 36431
• FlyBaseID: FBgn0005624
• Length: 1601
• Species: Drosophila melanogaster
• Sequence 2: NP_001255620.1
• Gene: mig-32 / 178150
• WormBaseID: WBGene00008684
• Length: 549
• Species: Caenorhabditis elegans
• Alignment Length: 540
• Identity: 116/540 - (21%)
• Similarity: 198/540 - (36%)
• Gaps: 105/540 - (19%)

  Fly     4 PESKAIQ------PAAATTKQTAEATATTTMAHTQQKSQLSTLA--------KTTTTTATNKAAK 54
            |||.|..      |:.:.||:.....::|.......|::..:..        .........:...
 Worm    38 PESDADSEDDYDGPSTSQTKKLKRGNSSTNRGKAANKTKRGSFQVKQEIMDDDENEEKIDGEVEN 102

  Fly    55 SVVSNANSSGNNSSKKLALSQS----QKTTTTTTPPTTTTTTTAAAAAEATTNADKMQKQQQLKQ 115
            .:.|..:|...::.||.|..|:    :|.:...||||:.:.:.:.:.:.:||.:|...|:.: |.
 Worm   103 GITSREHSPDPSTFKKTAKLQTKKKKKKESPPETPPTSPSPSPSRSVSPSTTKSDISSKKGR-KA 166

  Fly   116 QLFAACSIKVKSENTLATTANAAL--------AAATTTTTTATPALATGKA---------AKTIL 163
            .:.:...:|::.|:|...|....|        ....|.........|..||         .|..:
 Worm   167 VVNSVSKVKIEKESTPVKTNGRNLPPKRKKKPVEEETAEEIKLRERAERKARRIEEAKNRPKLTI 231

  Fly   164 ENGI-----KKESTPPAVE-SVEASSSSSSSSSSSSSSSSSWPTTRRATSEDASSNGG--ASADE 220
            |..:     |||......| ..|.|...........:.:|.|             |.|  :|.::
 Worm   232 EQKLAKLRKKKERRERRKEQEKEESMRQKYGQRKIKAEASKW-------------NFGPISSINQ 283

  Fly   221 EKSEE----DPTAAVAASSTATTTSD---LATTSRPRPVLLTAVNPHIICHLCQGYLINATTIVE 278
            .:.:|    .|.|...|........:   .||......||    ||.|.|.:|.||:::||||::
 Worm   284 RRRDEMMAYFPKANFLAEDGVPKVMNNFRRATVKYNMEVL----NPFITCGICDGYIVDATTIID 344

  Fly   279 CLHSFCHSCLINHLRKE-RFCPRCEMVINNAKPN--IKSDTTLQAIVYKLVPGLYERELMRKRAF 340
            |:|:||.|||:.:...: ..||.|...|:.:.|.  :..|..:..:|.:.||.:...||..::.|
 Worm   345 CMHTFCKSCLLTYFESDNNTCPTCGTFIHGSHPTHYVTYDRAVNELVNQFVPKMENNELDVRKTF 409

  Fly   341 YKDRPEEAALATPEQRGDDTEHLIFS--PSDDMSLSLEYAELGELKTDSE---------PELVDT 394
            .:|..|...:.|..:..:..|.|...  ...:....||.......:.|.:         ..|...
 Worm   410 LRDCREALGIDTAAEDRERKERLERERITGTNRCYPLERPRFSHHRDDCQVTVNLLPGTANLPLI 474

  Fly   395 LRPRYLQCPAMCRVSHLKKFVYDKFEIDAQRFSIDIMYKVKTIVLLDYY---TLMDIAYIYTWKR 456
            .|| |::|..|..::.||||:..:...|..|:|.           ||.:   .||.        :
 Worm   475 TRP-YVRCSEMTTMNTLKKFLSLQIWDDQSRYSD-----------LDMFCDGQLMG--------K 519

  Fly   457 DAPMRFYYRVYESPQPLVKP 476
            |..:||.:.:....||..:|
 Worm   520 DFSVRFVWMMKRRGQPKSEP 539

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Psc	NP_001286368.1	zf-C3HC4	263..301	CDD:278524	17/38 (45%)
		RAWUL	384..465	CDD:292824	21/92 (23%)
mig-32	NP_001255620.1	RING-HC_PCGF3	326..373	CDD:319649	19/46 (41%)
		RAWUL_PCGF_like	459..545	CDD:340519	23/101 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S3210
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1203951at2759
OrthoFinder	1	1.000	-	-		FOG0000290
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.870