DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr49 and ABCB26

DIOPT Version :10

Sequence 1:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_177218.3 Gene:ABCB26 / 843398 AraportID:AT1G70610 Length:700 Species:Arabidopsis thaliana


Alignment Length:553 Identity:188/553 - (33%)
Similarity:300/553 - (54%) Gaps:55/553 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   766 GDDDVVRAEVLKISMIFVGIGLMAGLGNMLQTYMFTTAGVKMTTRLRKRAFGTIIGQDIAYFDDE 830
            ||..|....|..:..:.|..|:.:|    ::...|..|.:.:..|:|:..:.|::.|||::||.:
plant   170 GDIAVFHRNVKLLVTLCVTSGICSG----IRGCFFGIANMILVKRMRETLYSTLLFQDISFFDSQ 230

  Fly   831 RNSVGALCSRLASDCSNVQGATGARVGTMLQAVATLVVGMVVGFVFSWQQTLLTLVTLPLVCLSV 895
              :||.|.|||.|||..|....|..:..:.:.|......::...:.||...|.|||...::...:
plant   231 --TVGDLTSRLGSDCQQVSRVIGNDLNMIFRNVLQGTGALIYLLILSWPLGLCTLVICCILAAVM 293

  Fly   896 YLEGRFIMKSAQKAKASIEEASQVAVEAITNIRTVNGLCLERQVLDQYVQQIDRV-DIACRRKVR 959
            ::.|.:..|:|:..:.....|::||.|..:.:|||.....|:|...:|...:.|: ||:.|:.. 
plant   294 FVYGMYQKKTAKLIQEITASANEVAQETYSLMRTVRVYGTEKQEFKRYNHWLQRLADISLRQSA- 357

  Fly   960 FRGLVFALGQAAPFLAYGI------SMYY---------GGILVAEERMNYEDIIK---VAEALIF 1006
                           ||||      ::|:         ||:.:...::..|.:.|   .:|.||:
plant   358 ---------------AYGIWNWSFNTLYHATQIIAVLVGGLSILAGQITAEQLTKFLLYSEWLIY 407

  Fly  1007 GSWMLGQALAYAPNVNDAILSAGRLMDLFKRTSTQPNPPQSPYNT-VEKSEGDIVYENVGFEYPT 1070
            .:|.:|.      |::..:.|.|....:|:....:|:.......| :::..|.|.:.:|.|.||:
plant   408 ATWWVGD------NLSSLMQSVGASEKVFQMMDLKPSDQFISKGTRLQRLTGHIEFVDVSFSYPS 466

  Fly  1071 RKGTPILQGLNLTIKKSTTVALVGPSGSGKSTCVQLLLRYYDPVSGSVNLSGVPSTEFPLDTLRS 1135
            |....::|.:|:::.....||:||.|||||||.|.|||:.|:|.||.:.|.|||..|..:..||.
plant   467 RDEVAVVQNVNISVHPGEVVAIVGLSGSGKSTLVNLLLQLYEPTSGQILLDGVPLKELDVKWLRQ 531

  Fly  1136 KLGLVSQEPVLFDRTIAENIAYGNNFRDDVSMQEIIEAAKKSNIHNFISALPQGYDTRLGKTSQL 1200
            ::|.|.|||.||...|:.||.||.:  .::|.::||.|||::..|:||:|||.||:| :.....|
plant   532 RIGYVGQEPKLFRTDISSNIKYGCD--RNISQEDIISAAKQAYAHDFITALPNGYNT-IVDDDLL 593

  Fly  1201 SGGQKQRIAIARALVRNPKILILDEATSALDLESEKVVQQAL----DEARSGRTCLTIAHRLTTV 1261
            |||||||||||||::|:|:||||||||||||.|||..|:..|    :::.:.|:.:.|||||:|:
plant   594 SGGQKQRIAIARAILRDPRILILDEATSALDAESEHNVKGVLRSIGNDSATKRSVIVIAHRLSTI 658

  Fly  1262 RNADLICVLKRGVVVEHGTHDELMALNKIYANL 1294
            :.||.|..:..|.|||.|:|.||::.:.:||.|
plant   659 QAADRIVAMDSGRVVEMGSHKELLSKDGLYARL 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr49NP_523724.2 MdlB 44..643 CDD:440747
MdlB 720..1299 CDD:440747 188/553 (34%)
ABCB26NP_177218.3 MdlB 122..695 CDD:440747 188/553 (34%)
Blue background indicates that the domain is not in the aligned region.

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