DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr49 and ABCB14

DIOPT Version :9

Sequence 1:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_174122.1 Gene:ABCB14 / 839694 AraportID:AT1G28010 Length:1247 Species:Arabidopsis thaliana


Alignment Length:1339 Identity:472/1339 - (35%)
Similarity:720/1339 - (53%) Gaps:152/1339 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VKKEESRLPQAGDFQLKEGSVVDATRKYSYFDLFRYSTRCERFLLVVSLLVATAASAFIPYFMII 66
            |||||.:       ::|:.|                          |||:...:|:..:.||::.
plant    18 VKKEEKK-------KMKKES--------------------------VSLMGLFSAADNVDYFLMF 49

  Fly    67 YGEFTSLLVDRTVGVGTSSPAFALPM----FGGG-QQLTNASKEENNQAIIDDATAFGIGSLVGS 126
            .|           |:||......||:    |||. ..|...|.:.|           .|.|.|..
plant    50 LG-----------GLGTCIHGGTLPLFFVFFGGMLDSLGKLSTDPN-----------AISSRVSQ 92

  Fly   127 VAMFLLITLAIDLAN---------RIALNQIDRIRKLFLEAMLRQDIAWYDTSS-GSNFASKMTE 181
            .|::|:....::|.:         :....|..|:|..:|:::|.:||.::||.: .|||...::.
plant    93 NALYLVYLGLVNLVSAWIGVACWMQTGERQTARLRINYLKSILAKDITFFDTEARDSNFIFHISS 157

  Fly   182 DLDKLKEGIGEKIVIVVFLIMTFVIGIVSAFVYGWKLTLVVLSCVPFIIAATSVVARLQGSLAEK 246
            |...:::.||:|...|:..:..|:.|.|..|:..|:|||:.|..||.|..|....|.:..:::||
plant   158 DAILVQDAIGDKTGHVLRYLCQFIAGFVIGFLSVWQLTLLTLGVVPLIAIAGGGYAIVMSTISEK 222

  Fly   247 ELKSYSDAANVVEEVFSGIRTVFAFSGQEKEKERFGKLLIPAENTGRKKGLYSGMGNALSWLIIY 311
            ...:|:||..|.|||.|.:|||:||.|:||..:.:...|..|....::.||..|:|..|::.:::
plant   223 SEAAYADAGKVAEEVMSQVRTVYAFVGEEKAVKSYSNSLKKALKLSKRSGLAKGLGVGLTYSLLF 287

  Fly   312 LCMALAIWYGVTLILDERDLPDRVYTPAVLVIVLFAVIMGAQNLGFASPHVEAIAVATAAGQTLF 376
            ...||..||...|:...:....:.:|      .:..||.....||.|.|.:.||:....|...:|
plant   288 CAWALLFWYASLLVRHGKTNGAKAFT------TILNVIYSGFALGQAVPSLSAISKGRVAAANIF 346

  Fly   377 NIIDRPSQVDPMD--EKGNRPENTAGHIRFEGIRFRYPARPDVEILKGLTVDVLPGQTVAFVGAS 439
            .:|.. :.::..:  |.|...:|..|.|.|.|:.|.||:||:: :.:.|:..:..|:|.||||.|
plant   347 KMIGN-NNLESSERLENGTTLQNVVGKIEFCGVSFAYPSRPNM-VFENLSFTIHSGKTFAFVGPS 409

  Fly   440 GCGKSTLIQLMQRFYDPEAGSVKLDGRDLRTLNVGWLRSQIGVVGQEPVLFATTIGENIRYGRPS 504
            |.||||:|.::||||:|.:|.:.|||.|::.|.:.|||.|:|:|.|||.||||||..||..|:..
plant   410 GSGKSTIISMVQRFYEPRSGEILLDGNDIKNLKLKWLREQMGLVSQEPALFATTIASNILLGKEK 474

  Fly   505 ATQADIEKAARAANCHDFITRLPKGYDTQVGEKGAQISGGQKQRIAIARALVRQPQVLLLDEATS 569
            |....|.:||:|||...||..||.||:|||||.|.|:|||||||||||||::|.|::||||||||
plant   475 ANMDQIIEAAKAANADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATS 539

  Fly   570 ALDPTSEKRVQSALELASQGPTTLVVAHRLSTITNADKIVFLKDGVVAEQGTHEELMERRGLYCE 634
            |||..|||.||.||:...:..||:|:|||||||.|.||||.|:||.|.|.|:|.||:.|.|.|..
plant   540 ALDAESEKIVQQALDNVMEKRTTIVIAHRLSTIRNVDKIVVLRDGQVRETGSHSELISRGGDYAT 604

  Fly   635 LVSITQRK----------EATEADEGAVAGRPLQKSQNLSDEETDDDEEDEEEDEEPELQTSGSS 689
            ||:....:          |:..:..|:.:.|.:     .|...|....||:|:.|          
plant   605 LVNCQDTEPQENLRSVMYESCRSQAGSYSSRRV-----FSSRRTSSFREDQEKTE---------- 654

  Fly   690 RDSGFRASTRRKRRSQRRKKKKDKEVVSKVSFT-QLMKLNSPEWRFIVVGGIASVMHGATFPLWG 753
                              |..|.::::|..|.. :|:|||:|||.:.::|.|.:|:.|:...|:.
plant   655 ------------------KDSKGEDLISSSSMIWELIKLNAPEWLYALLGSIGAVLAGSQPALFS 701

  Fly   754 L--------FFGDFFGILSDGDDDVVRAEVLKISMIFVGIGLMAGLGNMLQTYMFTTAGVKMTTR 810
            :        |:..|        ..:::.||.|:::||||.|::.....:||.|.:|..|.::|:|
plant   702 MGLAYVLTTFYSPF--------PSLIKREVDKVAIIFVGAGIVTAPIYILQHYFYTLMGERLTSR 758

  Fly   811 LRKRAFGTIIGQDIAYFDDERNSVGALCSRLASDCSNVQGATGARVGTMLQAVATLVVGMVVGFV 875
            :|...|..|:..:|.:||.:.|:.|:|.|.||:|.:.|:.|...|:.|::|.::..:..:.:.|.
plant   759 VRLSLFSAILSNEIGWFDLDENNTGSLTSILAADATLVRSAIADRLSTIVQNLSLTITALALAFF 823

  Fly   876 FSWQQTLLTLVTLPLVCLSVYLEGRFIMKSAQKAKASIEEASQVAVEAITNIRTVNGLCLERQVL 940
            :||:...:.....||:..:...|..|:.........:...|:.:|.|||:|||||.....|:|:.
plant   824 YSWRVAAVVTACFPLLIAASLTEQLFLKGFGGDYTRAYSRATSLAREAISNIRTVAAFSAEKQIS 888

  Fly   941 DQYVQQIDRVDIACRRKVRFRGLVFALGQAAPFLAYGISMYYGGILVAEERMNYEDIIKVAEALI 1005
            :|:..::.:...:...:....|..:.|.|...|.:|.:.::|..:|:.....|:||.||....|:
plant   889 EQFTCELSKPTKSALLRGHISGFGYGLSQCLAFCSYALGLWYISVLIKRNETNFEDSIKSFMVLL 953

  Fly  1006 FGSWMLGQALAYAPNV---NDAILSAGRLMDLFKRTSTQPNPPQSPYNTVEKSEGDIVYENVGFE 1067
            ..::.:.:.||..|::   ..|:.|..|:  |.:.|...|:.|.|  ..|...:|||.:.||.|.
plant   954 VTAYSVAETLALTPDIVKGTQALGSVFRV--LHRETEIPPDQPNS--RLVTHIKGDIEFRNVSFA 1014

  Fly  1068 YPTRKGTPILQGLNLTIKKSTTVALVGPSGSGKSTCVQLLLRYYDPVSGSVNLSGVPSTEFPLDT 1132
            ||||....|.:.|||.:....::|:||||||||||.:.|::|:|||.:|::.:.|.......|.:
plant  1015 YPTRPEIAIFKNLNLRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDPSNGNLCIDGHDIKSVNLRS 1079

  Fly  1133 LRSKLGLVSQEPVLFDRTIAENIAYGNNFRDDVSMQEIIEAAKKSNIHNFISALPQGYDTRLG-K 1196
            ||.||.||.|||.||..:|.|||.|||   ::.|..|||||||.:|.|.|||.:.:||.|.:| |
plant  1080 LRKKLALVQQEPALFSTSIHENIKYGN---ENASEAEIIEAAKAANAHEFISRMEEGYMTHVGDK 1141

  Fly  1197 TSQLSGGQKQRIAIARALVRNPKILILDEATSALDLESEKVVQQALDEARSGRTCLTIAHRLTTV 1261
            ..|||||||||:|||||::::|.:|:|||||||||..:||.||:|||:...|||.:.:||||:|:
plant  1142 GVQLSGGQKQRVAIARAVLKDPSVLLLDEATSALDTSAEKQVQEALDKLMKGRTTILVAHRLSTI 1206

  Fly  1262 RNADLICVLKRGVVVEHGTHDELMALNK-IYANLYLMQQ 1299
            |.||.|.||.:|.|||.|:|.||::.:. .|..|..:|:
plant  1207 RKADTIVVLHKGKVVEKGSHRELVSKSDGFYKKLTSLQE 1245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr49NP_523724.2 MdlB 34..640 CDD:224055 234/622 (38%)
ABC_membrane 116..352 CDD:279056 70/245 (29%)
ABC_MTABC3_MDL1_MDL2 402..636 CDD:213216 131/233 (56%)
MdlB 735..1299 CDD:224055 210/576 (36%)
ABC_membrane 739..998 CDD:279056 69/266 (26%)
ABC_MTABC3_MDL1_MDL2 1059..1298 CDD:213216 123/240 (51%)
ABCB14NP_174122.1 PTZ00265 47..1243 CDD:240339 458/1273 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 196 1.000 Domainoid score I898
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 876 1.000 Inparanoid score I60
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - mtm951
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

Return to query results.
Submit another query.