DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr49 and ABCB28

DIOPT Version :10

Sequence 1:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_194275.2 Gene:ABCB28 / 828650 AraportID:AT4G25450 Length:714 Species:Arabidopsis thaliana


Alignment Length:619 Identity:191/619 - (30%)
Similarity:309/619 - (49%) Gaps:83/619 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 VGTSSPAFALPMFGGG--QQLTNASKEENNQAIIDDATAFGIGSLVGSVAMFL----LITLAIDL 139
            :|.|:...::|:|.|.  :.|.....|.             :..|:..:|:..    :.|:|. :
plant   117 LGCSTCTLSMPVFSGRFFEVLIGVRPEP-------------LWRLLSKIAVLYSLEPIFTIAF-V 167

  Fly   140 ANRIAL--NQIDRIRKLFLEAMLRQDIAWYDTSSGSNFASKMTEDL--------DKLKEGIGEKI 194
            .|..|:  |.:..:|......:|.|...::|..........:|.||        |.:....|.:.
plant   168 TNMTAIWENVMAILRAQIFRRVLIQKAEFFDKYKVGELTGLLTSDLGALNSIVNDNISRDRGFRA 232

  Fly   195 VIVVF--LIMTFVIGIVSAFVYGWKLTLVVLSCVPFIIAATSVVARLQGSLAEKELKSYSDAANV 257
            ...||  :.:.|.:....|.|.|  |.::.:|.:..:...::|.......||:..:      ::.
plant   233 FTEVFGTICILFTLSPQLAPVLG--LLMLAVSVLVAVYKRSTVPVYKSHGLAQATM------SDC 289

  Fly   258 VEEVFSGIRTVFAFSGQEKEKERFGKLLIPAENTGRKKGLYSGMGNALSWLIIYLCMALAIW--- 319
            |.|.||.||||.:|||::::...||..::..:.:|.|.|.:..:..:::.:.:|:.: ||::   
plant   290 VSETFSAIRTVRSFSGEKRQMSIFGSQILAYKLSGLKLGTFKSINESITRVAVYISL-LALYCLG 353

  Fly   320 -------------------YGVTLILDERDLP-------------DRVYTPAVLVIVLFAVIMGA 352
                               |..||....:.|.             ||:.:....|.:..|:..|.
plant   354 GSKVKTGELAVGTVVSFIGYTFTLTFAVQGLVNTFGDLRGTFAAIDRINSILNAVDIDEALAYGL 418

  Fly   353 Q-NLGFASPHVEAIAVATAAGQTLFNI--IDRPSQVDPMDEKGNRPENTAGHIRFEGIRFRYPAR 414
            : ::.......|.:.:..:||..: ||  :|:....:.......|....||.:..:.:.|.||.|
plant   419 ERDIHTKKVQDENLKLFLSAGPNV-NIRHLDKYYMSNLKSTNNLRTLTWAGDVCLDDVHFAYPLR 482

  Fly   415 PDVEILKGLTVDVLPGQTVAFVGASGCGKSTLIQLMQRFYDPEAGSVKLDGRDLRTLNVGWLRSQ 479
            |||::|.||::.:..|...|.||:||.||||::||:.|||:|..|.:.:.|.|:|..:.......
plant   483 PDVKVLDGLSLTLNSGTVTALVGSSGAGKSTIVQLLARFYEPTQGRITVGGEDVRMFDKSEWAKV 547

  Fly   480 IGVVGQEPVLFATTIGENIRYGRPS--ATQADIEKAARAANCHDFITRLPKGYDTQVGEKGAQIS 542
            :.:|.||||||:.::.|||.||.|:  .::.||.|||:|||.||||..||:||||.|||:|..:|
plant   548 VSIVNQEPVLFSLSVAENIAYGLPNEHVSKDDIIKAAKAANAHDFIISLPQGYDTLVGERGGLLS 612

  Fly   543 GGQKQRIAIARALVRQPQVLLLDEATSALDPTSEKRVQSALELASQGPTTLVVAHRLSTITNADK 607
            |||:||:||||:|::...:|:|||||||||..||:.|||||....:..||||:||||||:.:|::
plant   613 GGQRQRVAIARSLLKNAPILILDEATSALDAVSERLVQSALNRLMKDRTTLVIAHRLSTVQSANQ 677

  Fly   608 IVFLKDGVVAEQGTHEELMERRGLYCELVSITQR 641
            |....||.:.|.|||.||:.::|.|..||. |||
plant   678 IAVCSDGKIIELGTHSELVAQKGSYASLVG-TQR 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr49NP_523724.2 MdlB 44..643 CDD:440747 191/619 (31%)
MdlB 720..1299 CDD:440747
ABCB28NP_194275.2 MdlB 94..709 CDD:440747 188/616 (31%)
Blue background indicates that the domain is not in the aligned region.

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