DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr49 and ABCB9

DIOPT Version :9

Sequence 1:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_001328203.1 Gene:ABCB9 / 827530 AraportID:AT4G18050 Length:1246 Species:Arabidopsis thaliana


Alignment Length:1337 Identity:493/1337 - (36%)
Similarity:728/1337 - (54%) Gaps:143/1337 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VKKEESRLPQAGDFQLKEGSVVDATRKYSYFDLFRYSTRCERFLLVVSLLVATAASAFIPYFMII 66
            :||||.|..:..:...|:..  ...:|.|:|.||.::.:.:..|:.|..:.|.......|:..:|
plant     1 MKKEEERKERMEEKSSKKND--GGNQKVSFFKLFSFADKTDVVLMTVGTIAAAGNGLTQPFMTLI 63

  Fly    67 YGEFTSLLVDRTVGVGTSSPAFALPMFGGGQQLTNASKEENNQAIIDDATAFGIGSLVGSVAMFL 131
            :|:..:       ..||:.|                  :...:.:...|..|...::...|..||
plant    64 FGQLIN-------AFGTTDP------------------DHMVREVWKVAVKFIYLAVYSCVVAFL 103

  Fly   132 LITLAIDLANRIALNQIDRIRKLFLEAMLRQDIAWYDTSSGS-NFASKMTEDLDKLKEGIGEKIV 195
            .::..:....|    |...||.|:|:.:|||||.::||.:.: ....:|:.|...:::.:|||:.
plant   104 QVSCWMVTGER----QSATIRGLYLKTILRQDIGYFDTETNTGEVIGRMSGDTILIQDAMGEKVG 164

  Fly   196 IVVFLIMTFVIGIVSAFVYGWKLTLVVLSCVPFIIAATSVVARLQGSLAEKELKSYSDAANVVEE 260
            ....|:.||:.|...||..|..|..|:.||:|.|:.|.:.::.:...:|.:...:|::|.||||:
plant   165 KFTQLLCTFLGGFAIAFYKGPLLAGVLCSCIPLIVIAGAAMSLIMSKMAGRGQVAYAEAGNVVEQ 229

  Fly   261 VFSGIRTVFAFSGQEKEKERFGKLLIPAENTGRKKGLYSGMGNALSWLIIYLCMALAIWYGVTLI 325
            ....||||.||:|:::..|::...|..|..|..::||.||.|......:|:....||:|||..||
plant   230 TVGAIRTVVAFTGEKQATEKYESKLEIAYKTVVQQGLISGFGLGTMLAVIFCSYGLAVWYGAKLI 294

  Fly   326 LDERDLPDRVYTPAVLVIVLFAVIMGAQNLGFASPHVEAIAVATAAGQTLFNIIDRPSQVDPMDE 390
            :      ::.|....::.|:|||:.|..:||..||.:.|.|...||...:|..|.|..::|..|.
plant   295 M------EKGYNGGQVINVIFAVLTGGMSLGQTSPSLNAFAAGRAAAFKMFETIKRSPKIDAYDM 353

  Fly   391 KGNRPENTAGHIRFEGIRFRYPARPDVEILKGLTVDVLPGQTVAFVGASGCGKSTLIQLMQRFYD 455
            .|:..|:..|.|..:.:.|||||||||:|..|.::.|..|:|||.||.||.||||:|.|::||||
plant   354 SGSVLEDIRGDIELKDVYFRYPARPDVQIFAGFSLFVPNGKTVALVGQSGSGKSTVISLIERFYD 418

  Fly   456 PEAGSVKLDGRDLRTLNVGWLRSQIGVVGQEPVLFATTIGENIRYGRPSATQADIEKAARAANCH 520
            ||:|.|.:|..||:.|.:.|:||:||:|.||||||||||.|||.||:..||..:|..|...||..
plant   419 PESGQVLIDNIDLKKLQLKWIRSKIGLVSQEPVLFATTIKENIAYGKEDATDQEIRTAIELANAA 483

  Fly   521 DFITRLPKGYDTQVGEKGAQISGGQKQRIAIARALVRQPQVLLLDEATSALDPTSEKRVQSALEL 585
            .||.:||:|.||.|||.|.|:|||||||:|||||:::.|::|||||||||||..||:.||.||..
plant   484 KFIDKLPQGLDTMVGEHGTQMSGGQKQRLAIARAILKNPKILLLDEATSALDAESERIVQDALVN 548

  Fly   586 ASQGPTTLVVAHRLSTITNADKIVFLKDGVVAEQGTHEELM-ERRGLYCELVSITQ--RKEATEA 647
            .....||:||||||:||..||.|..:..|.:.|:|||:|:: :..|.|.:||.:.:  ::||||:
plant   549 LMSNRTTVVVAHRLTTIRTADVIAVVHQGKIVEKGTHDEMIQDPEGAYSQLVRLQEGSKEEATES 613

  Fly   648 DEGAVAGRPLQKSQNLSDEETDDDEEDEEEDEEPELQTSGSSR-DSGFRASTRRKRRSQRRK--- 708
            :      ||          ||..|           ::.|||.| .|..|.|..|...|.|..   
plant   614 E------RP----------ETSLD-----------VERSGSLRLSSAMRRSVSRNSSSSRHSFSL 651

  Fly   709 ---------------KKKDKE---VVSKVSFTQLMKLNSPEWRFIVVGGIASVMHGATFPLWGLF 755
                           :.:|:|   ...|||..:|..||.||...:|:|.||:::||..||::||.
plant   652 ASNMFFPGVNVNQTDEMEDEENNVRHKKVSLKRLAHLNKPEIPVLVLGSIAAMVHGTVFPIFGLL 716

  Fly   756 FGDFFGILSDGDDDVVRAEVLK-----ISMIFVGIGLMAGLGNMLQTYMFTTAGVKMTTRLRKRA 815
            ......:..:      .|::||     .::|::.:||...:...:|.|.|..||.|:..|:|...
plant   717 LSSSINMFYE------PAKILKKDSHFWALIYIALGLTNFVMIPVQNYFFGIAGGKLIKRIRSMC 775

  Fly   816 FGTIIGQDIAYFDDERNSVGALCSRLASDCSNVQGATGARVGTMLQAVATLVVGMVVGFVFSWQQ 880
            |..::.|:|::|||..||               :...|..:..::|.:||:..|:::.|..:|..
plant   776 FDKVVHQEISWFDDTANS---------------RSLVGDALALIVQNIATVTTGLIIAFTANWIL 825

  Fly   881 TLLTLVTLPLVCLSVYLEGRFIMKSAQKAKASIEEASQVAVEAITNIRTVNGLCLERQVLDQYVQ 945
            .|:.|...|.:.:..|.:.:|:...:..|||..|||||||.:|:::||||...|.|.:|:|.|.|
plant   826 ALIVLALSPFIVIQGYAQTKFLTGFSADAKAMYEEASQVANDAVSSIRTVASFCAEEKVMDLYQQ 890

  Fly   946 QIDRVDIACRRKVRFRGLVFALGQAAPFLAYGISMYY-----------GGILVAEERMNYEDIIK 999
            :.|...   :..||. ||:...|       :|.|.::           |..|:...:..:.::.|
plant   891 KCDGPK---KNGVRL-GLLSGAG-------FGFSFFFLYCINCVCFVSGAGLIQIGKATFGEVFK 944

  Fly  1000 VAEALIFGSWMLGQALAYAPNVNDAILSAGRLMDLFKRTSTQPNPPQSPYNTVEKSEGDIVYENV 1064
            |..||...:..:.|..|.||:.|.|..||..:.|:...| .:.:.......|::...|||.:.:|
plant   945 VFFALTIMAIGVSQTSAMAPDSNKAKDSAASIFDILDST-PKIDSSSDEGTTLQNVNGDIEFRHV 1008

  Fly  1065 GFEYPTRKGTPILQGLNLTIKKSTTVALVGPSGSGKSTCVQLLLRYYDPVSGSVNLSGVPSTEFP 1129
            .|.||.|....|.:.|.|||....||||||.|||||||.:.::.|:|:|.||.:.:..|....|.
plant  1009 SFRYPMRPDVQIFRDLCLTIPSGKTVALVGESGSGKSTVISMIERFYNPDSGKILIDQVEIQTFK 1073

  Fly  1130 LDTLRSKLGLVSQEPVLFDRTIAENIAYGNNFRDDVSMQEIIEAAKKSNIHNFISALPQGYDTRL 1194
            |..||.::|||||||:||:.||..|||||..  ...:.:|||.|||.:|.|||||:|||||||.:
plant  1074 LSWLRQQMGLVSQEPILFNETIRSNIAYGKT--GGATEEEIIAAAKAANAHNFISSLPQGYDTSV 1136

  Fly  1195 GKTS-QLSGGQKQRIAIARALVRNPKILILDEATSALDLESEKVVQQALDEARSGRTCLTIAHRL 1258
            |:.. |||||||||||||||::::||||:|||||||||.|||:|||.|||.....||.:.:||||
plant  1137 GERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRL 1201

  Fly  1259 TTVRNADLICVLKRGVVVEHGTHDELMALN-KIYANL 1294
            ||::|||:|.|:|.||:.|.|.|:.||.:: ..||:|
plant  1202 TTIKNADVIAVVKNGVIAEKGRHETLMKISGGAYASL 1238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr49NP_523724.2 MdlB 34..640 CDD:224055 232/607 (38%)
ABC_membrane 116..352 CDD:279056 72/236 (31%)
ABC_MTABC3_MDL1_MDL2 402..636 CDD:213216 129/234 (55%)
MdlB 735..1299 CDD:224055 223/578 (39%)
ABC_membrane 739..998 CDD:279056 73/274 (27%)
ABC_MTABC3_MDL1_MDL2 1059..1298 CDD:213216 131/238 (55%)
ABCB9NP_001328203.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 162 1.000 Domainoid score I1247
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 876 1.000 Inparanoid score I60
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - mtm951
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

Return to query results.
Submit another query.