DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr49 and ABCB6

DIOPT Version :9

Sequence 1:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_181480.1 Gene:ABCB6 / 818533 AraportID:AT2G39480 Length:1407 Species:Arabidopsis thaliana


Alignment Length:1248 Identity:405/1248 - (32%)
Similarity:636/1248 - (50%) Gaps:127/1248 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 IRKLFLEAMLRQDIAWYDT-SSGSNFASKMTEDLDKLKEGIGEKIVIVVFLIMTFVIGIVSAFVY 214
            ||..:::.:|.||::::|| .:..:..|::..|:..::..:.||:...:..:.||:.|::..||.
plant   168 IRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLIIGFVN 232

  Fly   215 GWKLTLVVLSCVPFIIAATSVVARLQGSLAEKELKSYSDAANVVEEVFSGIRTVFAFSGQEKEKE 279
            .|::.|:.|:..|||:||..:.......|||....:|::||::.|:..|.:||::||:.:...|.
plant   233 CWEIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKY 297

  Fly   280 RFGKLLIPAENTGRKKGLYSGMGNALSWLIIYLCMALAIWYGVTLILDERDLPDRVYTPAVLVIV 344
            .:...|......|....|..|:|...::.:.....|:.:|.|...::..|.....:.|      .
plant   298 SYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAMQLWIGRFFVIHHRANGGEIIT------A 356

  Fly   345 LFAVIMGAQNLGFASPHVEAIAVATAAGQTLFNIIDRPSQVDPMDEKGNRPENTAGHIRFEGIRF 409
            |||||:....|..|:.:..:......|...||.:|.|.|  ...:::|.......|:|.|..:.|
plant   357 LFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSS--SGTNQEGIILSAVQGNIEFRNVYF 419

  Fly   410 RYPARPDVEILKGLTVDVLPGQTVAFVGASGCGKSTLIQLMQRFYDPEAGSVKLDGRDLRTLNVG 474
            .|.:||::.||.|..:.|...:.||.||.:|.|||::|.||:|||||..|.|.|||.:::.|.:.
plant   420 SYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE 484

  Fly   475 WLRSQIGVVGQEPVLFATTIGENIRYGRPSATQADIEKAARAANCHDFITRLPKGYDTQVGEKGA 539
            |||||||:|.|||.|.:.:|.|||.||| .||...||:||:.|:.|.||:.|.|||:||||:.|.
plant   485 WLRSQIGLVTQEPALLSLSIRENIAYGR-DATLDQIEEAAKKAHAHTFISSLEKGYETQVGKTGL 548

  Fly   540 QISGGQKQRIAIARALVRQPQVLLLDEATSALDPTSEKRVQSALELASQGPTTLVVAHRLSTITN 604
            .::..||.:::||||::..|.:|||||.|..||..:|:.||.||:|...|.:|:::|.|||.|.|
plant   549 TLTEEQKIKLSIARAVLLDPTILLLDEVTGGLDFEAERVVQEALDLLMLGRSTIIIARRLSLIRN 613

  Fly   605 ADKIVFLKDGVVAEQGTHEELMERRGLYCELVSITQRKEAT-----------------EADEGAV 652
            ||.|..:::|.:.|.|||:||:....||.||:..   :|||                 :|:..:.
plant   614 ADYIAVMEEGQLLEMGTHDELINLGNLYAELLKC---EEATKLPRRMPVRNYNDSAAFQAERDSS 675

  Fly   653 AGR--------------PLQKSQNL-SDEETDDDEEDEEEDEEP---ELQTSGSSRDSGFRASTR 699
            |||              .||:..|: ..:|...:.|:...|..|   :|..:|||.|.|.:..|.
plant   676 AGRGFQEPSSPKMAKSPSLQRGHNVFRSQELCFNSEESPNDHSPAPEKLGENGSSLDVGEKEPTI 740

  Fly   700 RKRRS----------------QRRKKK-------------------------------------- 710
            :::.|                ||:|..                                      
plant   741 KRQDSFEMRLPELPKIDIQCPQRQKSNGSDPESPISPLLISDPQNERSHSQTFSRPLGHSDDTSA 805

  Fly   711 -----KDKEVVSKVSFTQLMKLNSPEWRFIVVGGIASVMHGATFPLWGLFFGDFFGILSDGDDDV 770
                 ||.:.....||.:|.:|:.|||.:.|:|.|.:.:.|:..||...................
plant   806 SVKVAKDGQHKEPPSFWRLAQLSFPEWLYAVLGSIGAAIFGSFNPLLAYVIALVVTTYYTSKGSH 870

  Fly   771 VRAEVLKISMIFVGIGLMAGLGNMLQTYMFTTAGVKMTTRLRKRAFGTIIGQDIAYFDDERNSVG 835
            :|.||.|..:|...:|::..:.|.||.:.|...|.|||.|:|:..|..::..::.::|:|.||..
plant   871 LREEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWYDEEENSPD 935

  Fly   836 ALCSRLASDCSNVQGATGARVGTMLQAVATLVVGMVVGFVFSWQQTLLTLVTLPLVCLSVYLEGR 900
            .|..|||:|.:.|:.|...|:...:|....::|.:::|.:..|:..|:.|.|||::.||...:..
plant   936 TLSMRLANDATFVRAAFSNRLSIFIQDSFAVIVAILIGLLLGWRLALVALATLPVLTLSAIAQKL 1000

  Fly   901 FIMKSAQKAKASIEEASQVAVEAITNIRTVNGLCLERQVLDQYVQQIDRVDIACRRKVRFRGLV- 964
            ::...::..:....:||.|..:|:.||.||...|...:|::.|..|:.|:    .|:..|.|:. 
plant  1001 WLAGFSKGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLQRI----LRQSFFHGMAI 1061

  Fly   965 -FALG--QAAPFLAYGISMYYGGILVAEERMNYEDIIKVAEALIFGSWMLGQALAYAPNVNDAIL 1026
             ||.|  |...|....:.::|..:.|....|.....:.......|.::.|.:....||.:.....
plant  1062 GFAFGFSQFLLFACNALLLWYTALSVDRRYMKLSTALTEYMVFSFATFALVEPFGLAPYILKRRR 1126

  Fly  1027 SAGRLMDLFKRTST-QPNPPQ--SPYNTVEKSEGDIVYENVGFEYPTRKGTPILQGLNLTIKKST 1088
            |...:.::..|..| :|:...  ||.|..    |.|..:|:.|.||||....:|...:|.:....
plant  1127 SLASVFEIIDRVPTIEPDDTSALSPPNVY----GSIELKNIDFCYPTRPEVLVLSNFSLKVNGGQ 1187

  Fly  1089 TVALVGPSGSGKSTCVQLLLRYYDPVSGSVNLSGVPSTEFPLDTLRSKLGLVSQEPVLFDRTIAE 1153
            |||:||.|||||||.:.|:.||||||:|.|.|.|.....:.|..|||.:||:.|||::|..||.|
plant  1188 TVAVVGVSGSGKSTIISLIERYYDPVAGQVLLDGRDLKSYNLRWLRSHMGLIQQEPIIFSTTIRE 1252

  Fly  1154 NIAYGNNFRDDVSMQEIIEAAKKSNIHNFISALPQGYDTRLG-KTSQLSGGQKQRIAIARALVRN 1217
            ||.|.   |.:.|..|:.|||:.:|.|:|||:||.||||.:| :..:|:.||||||||||.:::|
plant  1253 NIIYA---RHNASEAEMKEAARIANAHHFISSLPHGYDTHIGMRGVELTQGQKQRIAIARVVLKN 1314

  Fly  1218 PKILILDEATSALDLESEKVVQQALDEARSG-RTCLTIAHRLTTVRNADLICVLKRGVVVEHGTH 1281
            ..||::|||:|:::.||.:|||:|||....| :|.:.||||:..:|:.|.|.||..|.:||.|||
plant  1315 APILLIDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRVAMMRHVDNIVVLNGGKIVEEGTH 1379

  Fly  1282 DELMALNKIYANL 1294
            |.|...|.:|..|
plant  1380 DCLAGKNGLYVRL 1392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr49NP_523724.2 MdlB 34..640 CDD:224055 175/489 (36%)
ABC_membrane 116..352 CDD:279056 52/201 (26%)
ABC_MTABC3_MDL1_MDL2 402..636 CDD:213216 112/233 (48%)
MdlB 735..1299 CDD:224055 196/569 (34%)
ABC_membrane 739..998 CDD:279056 68/262 (26%)
ABC_MTABC3_MDL1_MDL2 1059..1298 CDD:213216 114/238 (48%)
ABCB6NP_181480.1 PTZ00265 69..1389 CDD:240339 403/1243 (32%)
ABC_membrane 91..364 CDD:279056 52/201 (26%)
P-loop_NTPase 412..646 CDD:304359 113/234 (48%)
ABC_membrane 840..1111 CDD:279056 69/274 (25%)
P-loop_NTPase 1158..1394 CDD:304359 114/238 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 1.000 Domainoid score I2618
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X92
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.690

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