DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr49 and Abcb8

DIOPT Version :9

Sequence 1:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_083296.2 Gene:Abcb8 / 74610 MGIID:1351667 Length:717 Species:Mus musculus


Alignment Length:592 Identity:227/592 - (38%)
Similarity:323/592 - (54%) Gaps:79/592 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 IIDDATAFGIGSLVG-----SVAMFLL-----------ITLAIDLANRIALNQIDRIRKLFLEAM 159
            |:...|...:||.|.     ||.:.||           :.|...:..|:|::    :||....::
Mouse   157 IVAKYTRDHMGSFVSESRKLSVQLLLLYGVQGLLTFGYLVLLSHIGERMAMD----MRKALFSSL 217

  Fly   160 LRQDIAWYDTSSGSNFASKMTEDLDKLKEGIGEKIVIVVFL-IMTFVIG-IVSAFVYGWKLTLVV 222
            ||||||::|........|::|.|:.:.|...  |:||...| ..|.||| :||..:...:|||::
Mouse   218 LRQDIAFFDAKKTGQLVSRLTTDVQEFKSSF--KLVISQGLRSCTQVIGSLVSLSMLSPRLTLML 280

  Fly   223 LSCVPFIIAATSVVARLQGS----LAEKELKSYSDAANVVEEVFSGIRTVFAFSGQEKEKERFGK 283
            ....|.::.    |..|.||    |:.:..:..:.|..|.:|....:|||.||:.:::|:||:..
Mouse   281 AVVTPALMG----VGTLMGSGLRKLSRQCQEQIARATGVADEALGNVRTVRAFAMEKREEERYQA 341

  Fly   284 LL----IPAENTGRKKGLYSGMGNALSWLIIYLCMAL-AIWYGVTLILDER----DL------PD 333
            .|    ..||..||...|:.|:.|     |.:.||.| .::.|.:|:..::    ||      ..
Mouse   342 ELESCCCKAEELGRGIALFQGLSN-----IAFNCMVLGTLFIGGSLVAGQQLKGGDLMSFLVASQ 401

  Fly   334 RVYTPAVLVIVLFA-VIMGAQNLGFASPHVEAIAVATAAGQTLFNIIDRPSQVDPMDEKGNRP-E 396
            .|......:.|||. |:.|                 .:||..:|..: ..|.|.|:......| :
Mouse   402 TVQRSMASLSVLFGQVVRG-----------------LSAGARVFEYM-ALSPVIPLTGGYCIPNK 448

  Fly   397 NTAGHIRFEGIRFRYPARPDVEILKGLTVDVLPGQTVAFVGASGCGKSTLIQLMQRFYDPEAGSV 461
            :..|.|.|:.:.|.||.||...:||..|:.:..|:.||.||.||.||:|:..|::||||||||||
Mouse   449 DIRGSITFQNVTFSYPCRPGFNVLKDFTLKLPSGKIVALVGQSGGGKTTVASLLERFYDPEAGSV 513

  Fly   462 KLDGRDLRTLNVGWLRSQ-IGVVGQEPVLFATTIGENIRYGRPSATQADIEKAARAANCHDFITR 525
            .|||.||||||..|||.| ||.:.||||||||||.||||:|:..|:..::..|||.||.|:||:.
Mouse   514 TLDGHDLRTLNPSWLRGQVIGFISQEPVLFATTIMENIRFGKLDASDEEVYTAAREANAHEFISS 578

  Fly   526 LPKGYDTQVGEKGAQISGGQKQRIAIARALVRQPQVLLLDEATSALDPTSEKRVQSALELASQGP 590
            .|.||.|.|||:|..:|||||||:||||||::||.||:|||||||||..||:.||.||:.||.|.
Mouse   579 FPDGYSTVVGERGTTLSGGQKQRLAIARALIKQPTVLILDEATSALDAESERVVQEALDRASAGR 643

  Fly   591 TTLVVAHRLSTITNADKIVFLKDGVVAEQGTHEELMERRGLYCELVSITQRKEATEADEGAVAGR 655
            |.||:||||||:..|..|:.:.:|.|.|.||||||:::.|||.||:    |::..:|  ...:..
Mouse   644 TVLVIAHRLSTVRAAHSIIVMANGQVCEAGTHEELLKKGGLYSELI----RRQTLDA--SLTSTP 702

  Fly   656 PLQKSQN 662
            |.:|.::
Mouse   703 PAEKPED 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr49NP_523724.2 MdlB 34..640 CDD:224055 223/568 (39%)
ABC_membrane 116..352 CDD:279056 75/273 (27%)
ABC_MTABC3_MDL1_MDL2 402..636 CDD:213216 137/234 (59%)
MdlB 735..1299 CDD:224055
ABC_membrane 739..998 CDD:279056
ABC_MTABC3_MDL1_MDL2 1059..1298 CDD:213216
Abcb8NP_083296.2 MdlB 116..695 CDD:224055 224/574 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 695..717 3/17 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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