DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr49 and tap2t

DIOPT Version :10

Sequence 1:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster
Sequence 2:XP_005156356.1 Gene:tap2t / 556826 ZFINID:ZDB-GENE-130531-48 Length:728 Species:Danio rerio


Alignment Length:664 Identity:210/664 - (31%)
Similarity:330/664 - (49%) Gaps:110/664 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ESRLPQAGDFQLKEGSVVDATRKYSYFDLFRYSTRCERFLLVVSLLVATAA--SAFIPY-----F 63
            |...|..|..:.......|...:.....:.|||.....:|....:.::.||  ..||||     .
Zfish   128 EMAFPHGGSSKGGRNQKKDEEARALLMRVIRYSRLDYLYLGAAFIFLSLAALFETFIPYCTGKVI 192

  Fly    64 MIIYGEFT------SLLVDRTVGVGTSSPAFALPMFGGGQQLTNASKEENNQAIIDDATAFGIGS 122
            .|:.|::.      ::|:.....:|:|       ||.|                           
Zfish   193 DILSGKYQHSNFTWAILLLALCSLGSS-------MFSG--------------------------- 223

  Fly   123 LVGSVAMFLLITLAIDLANRIALNQIDRIRKLFLEAMLRQDIAWYDTSSGSNFASKMTEDLDKLK 187
            |.|.:.||.|        ||  ||:  |||.|..:.:::|:|.::|.....|.||::..|.||:.
Zfish   224 LRGGMFMFSL--------NR--LNK--RIRNLLFQNVMKQEIDFFDEIKPGNLASRLISDTDKMG 276

  Fly   188 EGIGEKI-VIVVFLIMT-----FVIGIVSAFVYGWKLTLVVLSCVPFIIAATSVVARLQ---GSL 243
            ..:...: |::..::.|     |::|:      .|:|||  |:|:..     .::|.||   .||
Zfish   277 RAVAMNVNVLLRSMVKTCGMLYFMLGV------SWQLTL--LTCIEM-----PLLAFLQNSYNSL 328

  Fly   244 AEKELKSYSD----AANVVEEVFSGIRTVFAFSGQEKEKERFGKLLIPAENTGRKKGLYSGMGNA 304
            ::|..|...|    ...:...|...|:||.:|..:.:|::|:.:.:.......|:||.||.    
Zfish   329 SQKTSKELQDCNAETGELASSVIGSIKTVRSFKAECQEQQRYEQTINRKLQVLRRKGFYSA---- 389

  Fly   305 LSWLIIYLCMALAIWYG--VTLILDERDL--PDRVYTPAVLVIVLFA--VIMGAQNLGFASPHVE 363
                 :||.:...|..|  |.::...|:|  ..::.:.::|..|.:.  ::...::|    .::.
Zfish   390 -----VYLLIRRFITVGLKVAMLCQGRNLISSGQLSSGSLLAFVFYQKDMVTSMKHL----VYIY 445

  Fly   364 AIAVATAAGQT-LFNIIDRPSQVDPMDEKGN-RPENTAGHIRFEGIRFRYPARPDVEILKGLTVD 426
            ...::|..... :|.::||..|   |.|.|: .||...|.|.||.:.|.|.:|||...||.:|::
Zfish   446 GDMLSTVGSSVKVFQLLDRKPQ---MREAGDLAPEKLKGRITFEKVTFSYLSRPDDTALKSVTLE 507

  Fly   427 VLPGQTVAFVGASGCGKSTLIQLMQRFYDPEAGSVKLDGRDLRTLNVGWLRSQIGVVGQEPVLFA 491
            :.||:..|.||.||.|||:.:.|:||||:|:.|.:.|||..|......:|..::.||.|:||||:
Zfish   508 LSPGKLTALVGPSGGGKSSCVSLLQRFYEPKEGEMFLDGEPLYHYQHQYLHKKVAVVSQDPVLFS 572

  Fly   492 TTIGENIRYGRPSATQADIEKAARAANCHDFITRLPKGYDTQVGEKGAQISGGQKQRIAIARALV 556
            .::..||.||....|...||:|||.||.|:||..|.:||||.|||.|.|:|.||||.|||||||:
Zfish   573 GSVRYNIEYGLQDCTLERIEEAARKANAHNFICNLEQGYDTDVGECGGQLSAGQKQCIAIARALI 637

  Fly   557 RQPQVLLLDEATSALDPTSEKRVQSALELASQGPTTLVVAHRLSTITNADKIVFLKDGVVAEQGT 621
            |.||:|:||||||.:|.::::.:|..|...:. .|.||:||||.||..||.|:|::.|.|.||||
Zfish   638 RNPQILILDEATSHMDSSTQQAIQDVLNSITD-QTVLVIAHRLETIEKADHIIFMEGGEVKEQGT 701

  Fly   622 HEELMERRGLYCEL 635
            |::||:::|.|..|
Zfish   702 HQQLMDKQGRYHRL 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr49NP_523724.2 MdlB 44..643 CDD:440747 203/626 (32%)
MdlB 720..1299 CDD:440747
tap2tXP_005156356.1 3a01208 28..715 CDD:273363 209/662 (32%)
Blue background indicates that the domain is not in the aligned region.

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