DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr49 and abcb8

DIOPT Version :10

Sequence 1:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_001017544.1 Gene:abcb8 / 548340 ZFINID:ZDB-GENE-050410-6 Length:714 Species:Danio rerio


Alignment Length:629 Identity:216/629 - (34%)
Similarity:332/629 - (52%) Gaps:54/629 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EGSVVDATRKYSYFDLFRYSTRCERFLLVVSLLVATAASAFIPYFMIIYGEFTSLLVDRTVGVGT 83
            |..|.:...::|:..|:.: .|.:.|.|:.::|:|..|:|......::.|:..:::         
Zfish   120 EVQVKEKIPEFSWAVLWEF-VRPQLFALMGAILLAFGAAALNIQIPLMLGDLVNVV--------- 174

  Fly    84 SSPAFALPMFGGGQQLTNASKEENNQA--IIDDATAFGIGSLVGSVAMFLLITLA-IDLANRIAL 145
                               ::....||  .:.|..|..: .|:|..|:..|:|.. |.|.:|:..
Zfish   175 -------------------ARHMREQAGHYMRDIQAPAV-KLLGLYALQGLLTSGYIILLSRVGE 219

  Fly   146 NQIDRIRKLFLEAMLRQDIAWYDTSSGSNFASKMTEDLDKLKEGIGEKIVIVVFL-IMTFVIG-I 208
            .....:|.....::||||||::|.:......:::|.|:.:.|...  |:||...| ..|..:| .
Zfish   220 RVAADMRTTLFTSLLRQDIAFFDANKTGQLVNRLTSDIQEFKSSF--KLVISQGLRSATQTVGCF 282

  Fly   209 VSAFVYGWKLTLVVLSCVPFIIAATSVVARLQGSLAEKELKSYSDAANVVEEVFSGIRTVFAFSG 273
            ||.:....|||.:.:..:|.::.|.:::......|:.|..:..:.|..|.:|....:|||.||:.
Zfish   283 VSLYFISPKLTGLTVVVLPCLVGAGALIGSFLRKLSRKAQEQVAKATGVADEALGNVRTVRAFAM 347

  Fly   274 QEKEKERFG----KLLIPAENTGRKKGLYSGMGNALSWLIIYLCMALAIWYGVTLILDERDLPDR 334
            :::|.|.:.    |.....|..|....::.|:.|     |:..|:.|...:....::...||   
Zfish   348 EDRELEMYAAEVQKSAAMNETLGTGIAVFQGLSN-----IVLNCIVLGTIFAGGSLMARDDL--- 404

  Fly   335 VYTPAVLVIVLFAVIMGAQNLGFASPHVEAIAVATAAGQTLFNIIDRPSQVDPMDEKGNRP-ENT 398
              :|..|:..|.|.....::|...|.....:....:||..:|..:.....| |:...|..| ::.
Zfish   405 --SPGDLMSFLVASQTVQRSLASISILFGQMVRGMSAGARVFEYLALDPSV-PLTGGGRIPLDSL 466

  Fly   399 AGHIRFEGIRFRYPARPDVEILKGLTVDVLPGQTVAFVGASGCGKSTLIQLMQRFYDPEAGSVKL 463
            .|.:.|..|.|.||.||..:|||..::.:.|.:|||.||.||.||||:..|::|||||.:|.|.|
Zfish   467 MGRVDFMNISFSYPTRPGNQILKHFSLTLPPCKTVAIVGESGGGKSTVAALLERFYDPSSGVVML 531

  Fly   464 DGRDLRTLNVGWLRSQ-IGVVGQEPVLFATTIGENIRYGRPSATQADIEKAARAANCHDFITRLP 527
            ||.|:|||:..|||.. ||.:.||||||.|::.||||:|:||||.|::..||:.||.|:|||...
Zfish   532 DGLDIRTLDPSWLRGHVIGFISQEPVLFGTSVMENIRFGKPSATDAEVVSAAKQANAHNFITGFA 596

  Fly   528 KGYDTQVGEKGAQISGGQKQRIAIARALVRQPQVLLLDEATSALDPTSEKRVQSALELASQGPTT 592
            .||:|.|||:|..:|||||||||||||||:.|.:|:|||||||||..||:.||.||:.|:.|.|.
Zfish   597 DGYNTVVGERGVTLSGGQKQRIAIARALVKNPSILILDEATSALDAESERVVQEALDRATTGRTV 661

  Fly   593 LVVAHRLSTITNADKIVFLKDGVVAEQGTHEELMERRGLYCELV 636
            |::|||||||..||.|..:.:|.:.|.|||.||:.:.|||.||:
Zfish   662 LIIAHRLSTIQAADLICVMSNGRIVEAGTHLELLSKGGLYAELI 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr49NP_523724.2 MdlB 44..643 CDD:440747 211/604 (35%)
MdlB 720..1299 CDD:440747
abcb8NP_001017544.1 MdlB 131..708 CDD:440747 214/618 (35%)
Blue background indicates that the domain is not in the aligned region.

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