DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr49 and ABCB7

DIOPT Version :9

Sequence 1:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster


Alignment Length:590 Identity:179/590 - (30%)
Similarity:293/590 - (49%) Gaps:54/590 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LVDRTVGV------GTSSPAFALPMF--GGGQQLTNASKEENNQAIIDDATA--FGIGSLVGSVA 128
            ||.:.||:      |:......:|..  |....:|..:.:....|::..|||  .|.|....|.|
  Fly   153 LVRKRVGISLGLLAGSKLLTVCVPFLFKGAVDTMTTLNMDTAPDAVLSAATALMLGYGIARASAA 217

  Fly   129 MFLLITLAIDLANRIALNQIDRIRKLFLEAMLRQDIAWY-DTSSGSNFASKMTEDLDKLKEGIGE 192
            .|..:..|:  ..::|.:.|.:|.......:...|:|:: :..:|:     :::.:|:...||..
  Fly   218 GFNELRNAV--FAKVAHHSIRKIASNVFLHLHNLDLAFHLNKQTGA-----LSKTIDRGSRGINF 275

  Fly   193 KIVIVVFLIM--TFVIGIVSAFVYGWKLTL----VVLSCVPFIIAATSVVARLQGSLAEKELKSY 251
            .:..:||.|:  .|.:.:||: :.|.|..|    |.:.||....|.|..|.:.:........::.
  Fly   276 VLSAMVFNIVPTIFELALVSS-ILGVKCGLAFAGVSMGCVGIYAAYTLSVTQWRTQFRVFMNQAE 339

  Fly   252 SDAANVVEEVFSGIRTVFAFSGQEKEKERFGKLLIPAE----NTGRKKGLYSGMGNALSWLIIYL 312
            ::|.|...:......||..|:.::.|...:.::|...|    .|.....|.:...||:....:.|
  Fly   340 NEAGNKAVDSLINYETVKYFNNEKYEAGCYNEVLKKYEAASLKTSSSLALLNFGQNAIFSSALSL 404

  Fly   313 CMALAIWYGVTLILDERDLPDRVYTPAVLVIV---LFAVIMGAQNLGFASPHVEAIAVATAAGQT 374
            .|.||          .:::.....|...||:|   ||.:.:....||.....|....:...|..|
  Fly   405 IMVLA----------AKEIAQGNMTVGDLVMVNALLFQLSIPLGFLGSVYREVRQALLDMRAMFT 459

  Fly   375 LFNI---IDRPSQVDPMDEKGNRPENTAGHIRFEGIRFRY-PARPDVEILKGLTVDVLPGQTVAF 435
            |.|:   |...:...|:     ..:.|...|.|..:.|.| |.:|   |.:.|:..:..|:.||.
  Fly   460 LMNVDSSIQTAANAQPL-----FVDTTNSSIEFRNVSFEYEPGKP---IFRDLSFTIPAGKNVAI 516

  Fly   436 VGASGCGKSTLIQLMQRFYDPEAGSVKLDGRDLRTLNVGWLRSQIGVVGQEPVLFATTIGENIRY 500
            ||.||.|||::::|:.||::|.:|.|.:.|:|:..:::..||..|.||.|:.|||..||..||.|
  Fly   517 VGGSGSGKSSMVRLLFRFFEPNSGKVLIGGQDISAVDLESLRKVIAVVPQDSVLFHNTIEHNIHY 581

  Fly   501 GRPSATQADIEKAARAANCHDFITRLPKGYDTQVGEKGAQISGGQKQRIAIARALVRQPQVLLLD 565
            |..|.:.|:::.|||.|:.||.|...|..|.|||||:|.::|||:|||:|||||:::...:|:.|
  Fly   582 GNLSKSHAEVQNAARMADLHDSIMSWPGQYSTQVGERGLKLSGGEKQRVAIARAILKNTPILIFD 646

  Fly   566 EATSALDPTSEKRVQSALELASQGPTTLVVAHRLSTITNADKIVFLKDGVVAEQGTHEELMERRG 630
            ||||:||..:|..:..||..|:.|.|::.:||||||:.:||:|:.|::|.|.|:|||.||:.:.|
  Fly   647 EATSSLDSITEHNILQALTRATSGRTSICIAHRLSTVKDADEILVLENGRVGERGTHSELLRQNG 711

  Fly   631 LYCEL 635
            ||..|
  Fly   712 LYARL 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr49NP_523724.2 MdlB 34..640 CDD:224055 179/590 (30%)
ABC_membrane 116..352 CDD:279056 54/251 (22%)
ABC_MTABC3_MDL1_MDL2 402..636 CDD:213216 105/235 (45%)
MdlB 735..1299 CDD:224055
ABC_membrane 739..998 CDD:279056
ABC_MTABC3_MDL1_MDL2 1059..1298 CDD:213216
ABCB7NP_728642.2 ABC_membrane 164..437 CDD:294371 60/290 (21%)
ATM1 222..717 CDD:227590 162/521 (31%)
P-loop_NTPase 485..720 CDD:304359 105/235 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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