DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr49 and Abcc10

DIOPT Version :9

Sequence 1:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_001334325.1 Gene:Abcc10 / 224814 MGIID:2386976 Length:1526 Species:Mus musculus


Alignment Length:1392 Identity:319/1392 - (22%)
Similarity:553/1392 - (39%) Gaps:355/1392 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 PAFALPMFGG----GQQLTNASKEENNQAIIDDATAFGIGSLVGSVAMF---LLITLAI------ 137
            |||...:|..    |.||..|.........:    |.|:..:||::..|   ||::|.:      
Mouse   257 PAFLARVFQAHWKEGAQLWRALYRAFGCCYL----ALGLLKMVGTMLGFSGPLLLSLLVGFLEEG 317

  Fly   138 -----------------DLANRIALNQID-RIRKLFLEAMLRQDIAWY----------------- 167
                             .:.:.:..||.. .:||:.|:|.:......|                 
Mouse   318 QEPLSHGLLYVLGLAGGTVISAVLQNQYGYEVRKVTLQARVAVLSTLYRKALKLGPSRPPTGEVL 382

  Fly   168 -----DTSSGSNFASKMTEDLDKLKEGIGEKIVIVVFLI-----MTFVIGIVSAFVYGWKLTLVV 222
                 |:....|||....|     ..|:..::.|.::|:     |.|:.|:|.|      |.||.
Mouse   383 NLLGTDSERLLNFAGSFHE-----AWGLPLQLAITLYLLYQQVGMAFLAGLVLA------LLLVP 436

  Fly   223 LSCVPFIIAATSVVARLQGSLAEKELKSYSDAANVVEEVFSGIRTVFAFSGQEKEKERFGKLLIP 287
            ::.|    .||.::|..|..|..|:.:     ..::.|:.||||.:..|..::...:|     :.
Mouse   437 VNKV----IATRIMASNQEMLRHKDAR-----VKLMTELLSGIRVIKFFRWEQALGDR-----VK 487

  Fly   288 AENT---GRKKGL-YSGMGNALSW--LIIYLCMALAIWYGVTLILDERDLPDRVYTPAVLVIVLF 346
            |..|   ||.:.: |........|  |.:.:|:.:.|.|   :::..:....:|:|...||.:| 
Mouse   488 ACRTKELGRLRVIKYLDAACVYLWAALPVVICITIFITY---VLMGHQLTATKVFTALALVRML- 548

  Fly   347 AVIMGAQNLGFASPHVEAIAVATAAGQTLFNIIDRPS-------QVDPMDEKGNRPENTAGHIRF 404
              |:...|..:.   :..:..:..:...:...:|.||       ..||                 
Mouse   549 --ILPLNNFPWV---INGLLESKVSLDRIQRFLDLPSYSPEAYYSPDP----------------- 591

  Fly   405 EGIRFRYPARPD--VEILKGL---------------TVDVLPGQTVAFVGASGCGKSTLIQLMQR 452
                   ||.|.  :|:.:.|               .:.|..|..|..||..|||||:|:     
Mouse   592 -------PAEPSTALELHEALFSWDPIGASQKTFISHLQVKKGMLVGIVGKVGCGKSSLL----- 644

  Fly   453 FYDPEAGSVKLDGRDLRTLNVGW-----LRSQIGVVGQEPVLFATTIGENIRYGRPSATQADIEK 512
                    ..:.| :|..| .||     |....|:..|||.:...||.:||.:|:....|. ..:
Mouse   645 --------AAITG-ELHRL-CGWVAVSELSKGFGLATQEPWIQCATIRDNILFGKTFDAQL-YRE 698

  Fly   513 AARAANCHDFITRLPKGYDTQVGEKGAQISGGQKQRIAIARALVRQPQVLLLDEATSALDPTSEK 577
            ...|...:|.::.||.|..|:|||||..:||||:.|||:|||:.::..:.|||:..:|:|.....
Mouse   699 VLEACALNDDLSILPAGDQTEVGEKGVTLSGGQRARIALARAVYQEKALYLLDDPLAAVDADVAN 763

  Fly   578 RVQSALELASQGPTT-LVVAHRLSTITNADKIVFLKDGVVAEQGTHEELMERRGLYCELVSITQR 641
            .:.....|.....|| |:..||...:..||.::.::.|.:...|...|::       .||.....
Mouse   764 HLLHRCILGVLSHTTRLLCTHRTEYLERADVVLLMEAGQLVRTGPPSEIL-------PLVQAVPT 821

  Fly   642 KEATEADEGAVAGRPLQKSQNLSDEETDDDEEDEEEDE------EPELQTSGS-----------S 689
            ..| |.::.|.:|    :|.::.|.|...:||.|.|..      :.|.::.|:           :
Mouse   822 AWA-EKEQVATSG----QSPSVCDLERTTEEELEVEQSTCGCLVQEESKSEGAVALHVYRAYWRA 881

  Fly   690 RDSGFRA----------STRR-----------KRRSQRRKKKKDKEVVSKVS---FTQLMKLNSP 730
            ..||..|          :||.           :.::.|...::|....|..|   |:..:.|.||
Mouse   882 MGSGLAAAILVSLLLMQATRNGADWWLAHWLSQLKAGRNGSREDPASCSPGSTALFSPRLLLFSP 946

  Fly   731 EWRFIVVGGIASVMHGATFPLWGLFFGDFFGILSDGDDDVVRAEVLKISMIFVGIGLMAGLGNML 795
            ...:..:  :::.:|.|.               |:|     .|:|....:::..|..:..|..:|
Mouse   947 GNLYTPL--LSTPLHKAA---------------SNG-----TADVHFYLIVYATIAGVNSLCTLL 989

  Fly   796 QTYMFTTAGVKMTTRLRKRAFGTIIGQDIAYFDDERNSVGALCSRLASDCSNVQGATGARVGTML 860
            :..:|....::....|..|....::...:.::|...:  |.:.:|.:||.:.|..:....:..:|
Mouse   990 RAVLFAAGALQAAASLHHRLLHRLLMAPVTFYDSTPS--GRVLNRFSSDVACVDDSLPFLLNILL 1052

  Fly   861 -QAVATLVVGMVVGFVFSWQQTLLTLVTLPLVCLSVYLEGRFIMKSAQKAKASIEEASQVAVEAI 924
             .:|..|.:..|:|....|  .||.|..|..|..||  :|.:        :||..|..::.....
Mouse  1053 ANSVGLLGLLAVLGSGLPW--LLLLLPPLSFVYYSV--QGYY--------RASFRELRRLGSLTW 1105

  Fly   925 TNI-----RTVNGLCLERQVLDQYVQQIDRVDIACRRKVRFRGLVFALGQAAPFLAYGISMY--- 981
            :.:     .|:.||.:.|.....|     |.:...:|       :..|.|...|.:|....:   
Mouse  1106 SPLYSHLADTLAGLPVLRAAGATY-----RFEEENQR-------LLELNQRCQFASYATMQWLDI 1158

  Fly   982 ------------YGGILVAEERMNYEDIIKVAEALIFGSWMLGQALAYAPNVNDAILSAGRLMDL 1034
                        ..||.:.:.:..           :....::|..|:||.::. .:||.  |:..
Mouse  1159 RLQLMGAAVVSAIAGIALVQHQQG-----------LANPGLVGLVLSYALSLT-GLLSG--LVSS 1209

  Fly  1035 FKRTSTQP-----------NPPQSPYNTVEKS----------EGDIVYENVGFEYPTRKGTP-IL 1077
            |.:|....           :.||.|::...:|          :|.:.:::|...|  |.|.| .|
Mouse  1210 FTQTEAMMVSVERLEEYSCDVPQEPHSQPLQSPHQQRISWLTQGSVEFQDVVLVY--RPGLPNAL 1272

  Fly  1078 QGLNLTIKKSTTVALVGPSGSGKSTCVQLLLRYYDPVSGSVNLSGVPSTEFPLDTLRSKLGLVSQ 1142
            .|:...::....:.:||.:|||||:...:|.|..:|.:|.|.|..|.:::..|..|||:|.::.|
Mouse  1273 DGVTFRVEPGEKLGIVGRTGSGKSSLFLVLFRLLEPNAGRVLLDNVDTSQLELAELRSQLAVIPQ 1337

  Fly  1143 EPVLFDRTIAENIAYGNNFRDDVSMQEIIE---------------AAKKS-----NIHNFISA-L 1186
            ||.||..||.||:. .....:|.::.:.:|               |.::|     |.|...|| |
Mouse  1338 EPFLFSGTIRENLD-PQGLHEDRALWQALEQCHLSEVAVAMGESQACQRSQREAKNGHWQCSALL 1401

  Fly  1187 PQGYDTRLGKTSQ-LSGGQKQRIAIARALVRNPKILILDEATSALDLESEKVVQQALDEARSGRT 1250
            ..|.|..||:..| ||.||:|.:.:||||:.:.|||.:||||:::|.::::::||.:.:..:.:|
Mouse  1402 TGGLDGELGERGQNLSLGQRQLLCLARALLTDAKILCIDEATASVDQKTDQLLQQTICKRFANKT 1466

  Fly  1251 CLTIAHRLTTVRNADLICVLKRGVVVE 1277
            .|||||||.|:.|:|.:.||:.|.|||
Mouse  1467 VLTIAHRLNTILNSDRVLVLQAGRVVE 1493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr49NP_523724.2 MdlB 34..640 CDD:224055 146/647 (23%)
ABC_membrane 116..352 CDD:279056 61/295 (21%)
ABC_MTABC3_MDL1_MDL2 402..636 CDD:213216 69/256 (27%)
MdlB 735..1299 CDD:224055 147/608 (24%)
ABC_membrane 739..998 CDD:279056 48/279 (17%)
ABC_MTABC3_MDL1_MDL2 1059..1298 CDD:213216 85/242 (35%)
Abcc10NP_001334325.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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