DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr49 and haf-7

DIOPT Version :10

Sequence 1:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_506645.1 Gene:haf-7 / 190115 WormBaseID:WBGene00001817 Length:807 Species:Caenorhabditis elegans


Alignment Length:621 Identity:206/621 - (33%)
Similarity:314/621 - (50%) Gaps:46/621 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   681 PELQTSGSSRDSGFRASTRRKRRSQRRKKKKDKEVVSKVSFTQLMKLNSPEWRFIVVGGIASVMH 745
            |...||.:||.|    ||..:......|::|:|.:.......|::||.|.:|::.          
 Worm   183 PTAATSSTSRSS----STDEEDNDAVSKEEKEKRLPLLTHLWQIVKLCSVQWKWF---------- 233

  Fly   746 GATFPLWGLFFGDFFGILSDGDDDVVRAEVLKISMIFVGIGLMAGLGNMLQTYMFTTAGV----- 805
            .|.:.|  ||......::    :..:.::::..::......::.....:|....||.|.|     
 Worm   234 SAAYVL--LFVDCILNLI----EPALYSQMMSTAIRMKSFDVLKRACIVLAAVQFTEATVNTVRY 292

  Fly   806 -------KMTTR-LRKRAFGTIIGQDIAYFDDERNSVGALCSRLASDCSNVQGATGARVGTMLQA 862
                   ::|.| :|...|..|:.|||::|||  |..|.|.||:..|..::..:....:.|.:..
 Worm   293 ICMQYAERLTARNIRVSLFRAILHQDISFFDD--NKTGQLMSRITKDSESISNSLPVYIETTVNN 355

  Fly   863 VATLVVGMVVGFVFSWQQTLLTLVTLPLVCLSVYLEGRFIMKSAQKAKASIEEASQVAVEAITNI 927
            ...|.....:.|.:|||..:.|.||.|::.|:....|..:.|.::|...:...:::...|.::.|
 Worm   356 SFMLFGSAPIMFYYSWQLAISTFVTFPIILLTTKFYGLIVEKLSEKENDATAVSNETVEEVLSAI 420

  Fly   928 RTVNGLCLERQVLDQYVQQIDRVDIACRRKVRFRGLVFALGQAAPFLAYGISMY-YGGILVAEER 991
            |||.....|:....:|.:..|.......:.|.| |..|....|..:....:.:| |||.|....|
 Worm   421 RTVRSFAAEKIENMRYTRDTDAWFKISTKTVVF-GTFFNYFWATMWNIEDVIIYLYGGYLTLNGR 484

  Fly   992 MNYEDIIKVAEALIFGSWMLGQAL-AYAPNVNDAILSAGRLMDLFKRTSTQPNPPQSPYNTVEKS 1055
            |..:.::    ..||..|.|..|| |::...:|.:.:.|....:....:.||...........:.
 Worm   485 MEPDALL----TYIFYHWRLHSALNAFSSLFSDVMKTIGSSRKVIHIMNRQPELDYEFGTETPEI 545

  Fly  1056 EGDIVYENVGFEYPTRKGTPILQGLNLTIKKSTTVALVGPSGSGKSTCVQLLLRYYDPVSGSVNL 1120
            .|:|::|:|.|.|||||...:|..:||:|....|:|||||||:||||.|.|:.::|.|.||.:.:
 Worm   546 VGNIIFEDVEFAYPTRKNANVLNKINLSIDPGKTIALVGPSGNGKSTLVSLIQQFYTPQSGRILI 610

  Fly  1121 SGVPSTEFPLDTLRSKLGLVSQEPVLFDRTIAENIAYGNNFRDDVSMQEIIEAAKKSNIHNFISA 1185
            .|.|..........:.:.||:|||.||..|:.|||.||.....|..|..:.|.|   |:|.|:|.
 Worm   611 DGTPIQNIDHLHYHTNIALVAQEPTLFSGTVRENILYGLENGTDEDMMRVAEMA---NVHEFVSK 672

  Fly  1186 LPQGYDTRLG-KTSQLSGGQKQRIAIARALVRNPKILILDEATSALDLESEKVVQQALDEARSGR 1249
            :.:||||:.| |..|:||||||||||||||:|:|::|||||||||||.|||.:||:||:.....|
 Worm   673 MEKGYDTKCGEKGVQMSGGQKQRIAIARALIRDPRVLILDEATSALDSESEAMVQEALNRCARER 737

  Fly  1250 TCLTIAHRLTTVRNADLICVLKRGVVVEHGTHDELM 1285
            |.|.|||||:|||:||.|.|:::|.|.|.|.|:|||
 Worm   738 TVLVIAHRLSTVRSADRIAVIEKGNVTEMGNHEELM 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr49NP_523724.2 MdlB 44..643 CDD:440747
MdlB 720..1299 CDD:440747 195/582 (34%)
haf-7NP_506645.1 MdlB 219..788 CDD:440747 195/581 (34%)
Blue background indicates that the domain is not in the aligned region.

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