DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr49 and abcb11.2

DIOPT Version :9

Sequence 1:NP_523724.2 Gene:Mdr49 / 36428 FlyBaseID:FBgn0004512 Length:1302 Species:Drosophila melanogaster
Sequence 2:XP_004917764.1 Gene:abcb11.2 / 100489579 XenbaseID:XB-GENE-988819 Length:1349 Species:Xenopus tropicalis


Alignment Length:1359 Identity:540/1359 - (39%)
Similarity:792/1359 - (58%) Gaps:125/1359 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KKEESRLPQAGDFQLKEGSVVDATRKYSYFDLFRYSTRCERFLLVVSLLVATAASAFIPYFMIIY 67
            ||:||:       :..|.|:     :..:|.|||::|..|..:::...|.|....|..|..::::
 Frog    41 KKDESK-------KKPEDSI-----RVGFFQLFRFATCSETTMMLFGSLAAIIHGAAQPCMLLVF 93

  Fly    68 GEFTSLLVDRTVGVGTSSPAFALPMFGGGQQLTNASKEENNQAII---------DDATAFGIGSL 123
            |    |::|..:       .:.:.|    |:|.:.:|...|..|.         .|...|..|.|
 Frog    94 G----LMIDTFI-------EYDIEM----QELRDPNKTCTNNTITWTNGSLVPDKDNKTFSCGML 143

  Fly   124 ---------------VGSVAMFLLITLAIDLANRIALNQIDRIRKLFLEAMLRQDIAWYDTSSGS 173
                           :| .::.:|..:.|......|..||.|||||:...::|.:|.|:|.:|..
 Frog   144 DIELEMTNFASYYAGIG-CSVLILGYMQICFWVTAAARQIQRIRKLYFRKVMRMEIGWFDCTSVG 207

  Fly   174 NFASKMTEDLDKLKEGIGEKIVIVVFLIMTFVIGIVSAFVYGWKLTLVVLSCVPFIIAATSVVAR 238
            ...::|::|::|:.:.|.:::.|.:....||:.|.:..||.||||||::::..|.|....:::|.
 Frog   208 ELNTRMSDDINKINDAIADQVGIFIQRFTTFLSGFLLGFVNGWKLTLIIIAVSPLIGVGAALMAL 272

  Fly   239 LQGSLAEKELKSYSDAANVVEEVFSGIRTVFAFSGQEKEKERFGKLLIPAENTGRKKGLYSGMGN 303
            ....|..:||.:|:.|..|.:||.||||||.||.|:.||.:|:.:.|:.|:..|.:||:..|...
 Frog   273 AVAKLTGRELLAYAKAGAVADEVLSGIRTVAAFGGETKEVDRYDRNLVYAQRWGIRKGIIMGFFT 337

  Fly   304 ALSWLIIYLCMALAIWYGVTLILDERDLPDRVYTPAVLVIVLFAVIMGAQNLGFASPHVEAIAVA 368
            ...|.||:||.|||.|||..|:|:|.:     |:|..|:.|...|::||.|||.|||.::|.|..
 Frog   338 GYMWFIIFLCYALAFWYGSKLVLEEEE-----YSPGNLLQVFLGVLVGALNLGQASPCLQAFASG 397

  Fly   369 TAAGQTLFNIIDRPSQVDPMDEKGNRPENTAGHIRFEGIRFRYPARPDVEILKGLTVDVLPGQTV 433
            ..|...:|..||...::|.|.|:|.:.:...|.|.|..|.|.||:||:|:||..:.:.:..|:|.
 Frog   398 RGAATNIFETIDNEPKIDCMSEEGYKLDKVKGEIEFHNISFHYPSRPEVKILDKINMVIKSGETT 462

  Fly   434 AFVGASGCGKSTLIQLMQRFYDPEAGSVKLDGRDLRTLNVGWLRSQIGVVGQEPVLFATTIGENI 498
            ||||.||.||||.:||:||||||:.|.|.|||.|:|:||:.||||.||:|.||||||||||.|||
 Frog   463 AFVGPSGAGKSTTVQLIQRFYDPDVGMVTLDGHDIRSLNIQWLRSLIGIVEQEPVLFATTIAENI 527

  Fly   499 RYGRPSATQADIEKAARAANCHDFITRLPKGYDTQVGEKGAQISGGQKQRIAIARALVRQPQVLL 563
            |||:.:||..:|..||:.||.::||..||:.:||.|||.|.|:||||||||||||||||.|::||
 Frog   528 RYGKENATMEEIITAAKEANAYNFIMDLPQKFDTLVGEGGGQMSGGQKQRIAIARALVRNPRILL 592

  Fly   564 LDEATSALDPTSEKRVQSALELASQGPTTLVVAHRLSTITNADKIVFLKDGVVAEQGTHEELMER 628
            ||.||||||..||..||.||:....|.||:.:|||||||.|||.||..:.|...|:|||:||:||
 Frog   593 LDMATSALDNESEAIVQEALDKVRFGRTTISIAHRLSTIKNADVIVGFEHGRAVEKGTHDELLER 657

  Fly   629 RGLYCELVSITQRKEATEADEGAVAGRPLQKSQNLSDEETDDDEEDEEEDEEPELQT----SGSS 689
            :|:|..||::        ..:|..|...::|.           ::..:|.|||:|:|    ...|
 Frog   658 KGVYFTLVTL--------QSQGDKALHNMEKK-----------DKSNKEFEEPKLETLQPLKRGS 703

  Fly   690 RDSGFRASTRRKRRSQ-------------------------------RRKKKKDKEVVSKVS--- 720
            ..:..|||.|::.|||                               .....|.:|:|..:.   
 Frog   704 YQASLRASIRQRSRSQLSNLVPDTPLLVVGADASDPIQHSTHYDDESDNNMIKTEEIVEDIEPAP 768

  Fly   721 FTQLMKLNSPEWRFIVVGGIASVMHGATFPLWGLFFGDFFGILSDGDDDVVRAEVLKISMIFVGI 785
            ..:::|.|:|||.:::.|.|.:.::||..||:.|.|....||.|..|::..|.::..|.::||.|
 Frog   769 VARILKYNAPEWPYMLFGSIGAAINGAVSPLYALLFSQILGIFSLPDEEEQRDQINGICVLFVLI 833

  Fly   786 GLMAGLGNMLQTYMFTTAGVKMTTRLRKRAFGTIIGQDIAYFDDERNSVGALCSRLASDCSNVQG 850
            |:::.|...||.|.|..:|..:|.||||..|.:::||::.:|||.|||.|||.:|||:|.|.|||
 Frog   834 GVVSFLTQFLQGYTFAKSGELLTRRLRKLGFRSMLGQEVGWFDDPRNSPGALTTRLATDASQVQG 898

  Fly   851 ATGARVGTMLQAVATLVVGMVVGFVFSWQQTLLTLVTLPLVCLSVYLEGRFIMKSAQKAKASIEE 915
            |||:::|.::.|::.:.|.:::.|.|||:.||:.:..||.:.:|..|:.:.:...|.:.|.::|.
 Frog   899 ATGSQIGMIVNAISNIGVALIIAFYFSWKLTLVIMCFLPFLAVSGALQAKMLTGFANQDKHAMES 963

  Fly   916 ASQVAVEAITNIRTVNGLCLERQVLDQYVQQIDRVDIACRRKVRFRGLVFALGQAAPFLAYGISM 980
            |.:::.||:.||||:.|:..|:..:|.|.:|::....:..:|....||.|...|...|:|..:|.
 Frog   964 AGRISSEALGNIRTIAGIAKEKTFVDMYEEQLEAPYRSAIKKANVYGLCFGFAQCIVFIANTVSY 1028

  Fly   981 YYGGILVAEERMNYEDIIKVAEALIFGSWMLGQALAYAPNVNDAILSAGRLMDLFKRTSTQPNPP 1045
            .|||.||.:|.::|..:.:|..:::.....||:|.:|.|:...|.:||.|...|..|.     |.
 Frog  1029 RYGGYLVDKEGLHYSFVFRVISSIVTSGTALGRASSYTPDYAKAKISAARFFKLVDRI-----PK 1088

  Fly  1046 QSPYNTVEKS----EGDIVYENVGFEYPTRKGTPILQGLNLTIKKSTTVALVGPSGSGKSTCVQL 1106
            .|.|....:.    :|.|.:::..|.||||....:|.||::::|...|:|.||.||.||||.|||
 Frog  1089 ISVYTDHGERWPDFKGSIDFQDCKFTYPTRPDIQVLNGLDVSVKPGQTLAFVGSSGCGKSTSVQL 1153

  Fly  1107 LLRYYDPVSGSVNLSGVPSTEFPLDTLRSKLGLVSQEPVLFDRTIAENIAYGNNFRDDVSMQEII 1171
            |.|:|||..|.|.:.|..|....:..||||:|:|||||||||.:|.|||.||:| ..::|..:||
 Frog  1154 LERFYDPDKGKVLIDGHNSKNVNVAFLRSKIGIVSQEPVLFDCSIIENIRYGDN-NQELSKDKII 1217

  Fly  1172 EAAKKSNIHNFISALPQGYDTRLG-KTSQLSGGQKQRIAIARALVRNPKILILDEATSALDLESE 1235
            ||:||:.:|:|:..||..|||.:| ..||||.|||||||||||:||:||||:|||||||||.|||
 Frog  1218 EASKKAQLHDFVMGLPDKYDTNVGAHGSQLSRGQKQRIAIARAIVRDPKILLLDEATSALDTESE 1282

  Fly  1236 KVVQQALDEARSGRTCLTIAHRLTTVRNADLICVLKRGVVVEHGTHDELMALNKIYANL 1294
            |.||.|||.||.||||:.|||||:|::|:|:|.|:.||:|:|.|.|:|||.....|..|
 Frog  1283 KTVQAALDRAREGRTCIVIAHRLSTIQNSDIIAVMSRGIVIEKGNHEELMEKKGAYYKL 1341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr49NP_523724.2 MdlB 34..640 CDD:224055 263/629 (42%)
ABC_membrane 116..352 CDD:279056 83/250 (33%)
ABC_MTABC3_MDL1_MDL2 402..636 CDD:213216 140/233 (60%)
MdlB 735..1299 CDD:224055 245/565 (43%)
ABC_membrane 739..998 CDD:279056 94/258 (36%)
ABC_MTABC3_MDL1_MDL2 1059..1298 CDD:213216 134/237 (57%)
abcb11.2XP_004917764.1 PTZ00265 159..1340 CDD:240339 510/1211 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3130
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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