DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sans and ush1ga

DIOPT Version :9

Sequence 1:NP_610829.1 Gene:Sans / 36427 FlyBaseID:FBgn0033785 Length:516 Species:Drosophila melanogaster
Sequence 2:XP_002661315.1 Gene:ush1ga / 100330314 ZFINID:ZDB-GENE-131120-173 Length:471 Species:Danio rerio


Alignment Length:544 Identity:181/544 - (33%)
Similarity:282/544 - (51%) Gaps:104/544 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SDRFHKAAKDGLLDVLAAATRKDTNAKDSDSMTPVMWAAFEGRLDALRLLCGRGGDPDKCDQFGN 67
            :|::||||:||.||:|..|||||.||.|.|.|||.:|||:.|.||||||:.||||:|||||.:||
Zfish     2 NDKYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLDALRLIAGRGGNPDKCDIWGN 66

  Fly    68 TALHLASAKGHLHCVDFLVKFGVNIYALDIDKHSAKDLAAINGRDEILRYLDVAFTNFEATEKKK 132
            |.||||::.|||:|:.|||.||.|::.||.|.|:..|:||.....:.:||||.......|...|.
Zfish    67 TPLHLAASNGHLNCLSFLVSFGANVWCLDNDYHTPLDMAATKNHMDCVRYLDSIAAKQTALNPKL 131

  Fly   133 SKALKELAEKNCEKRVREYMKRQNQQQQRQDPEY----SDLSAPSGSSKTGNMLSTLKQKIWS-- 191
            ...||:.|.::.|:|::|.:|.|.:.::|.:.::    ::.|.....|.:....|||.:|:..  
Zfish   132 VSKLKDRAFRDAERRIKECVKLQQRHRRRMERKFQREATEASVSDAMSFSSYASSTLSRKLHHFN 196

  Fly   192 -------SQGNLNKTPRDTPPPTKFSDLVGNGSSSSGGSTIASRAGTVQKRPSQLQKQHSSTCPH 249
                   ||..::.|.|                    |.|      .:||:   |:|:...    
Zfish   197 TATNVPYSQATIHATAR--------------------GKT------KIQKK---LEKKKQG---- 228

  Fly   250 SKISSDTDGGFKVREVEPDGKRTITSLTGLQRDSEVLYV--GTFSSNEDSVGKRGKISDVFECME 312
                   ||.||:.|   ||::::.||:|||..::|:::  ||:.:.:|.  .|..|.|:|.   
Zfish   229 -------DGTFKIYE---DGRKSVRSLSGLQLGNDVMFLKQGTYVNPKDR--SRRNIRDMFP--- 278

  Fly   313 ADELDHSDNRSGYSSTLARSFSQPDILGDGQLTQELSEEVTLQRPVGLFDRPTMLGSIAFRRS-V 376
                  |||    ...::|:.|:||:.|.   ..:.||..|......||:||. ||::.|||: |
Zfish   279 ------SDN----EDAISRAISEPDLHGQ---DVDYSEISTDSGHDSLFNRPG-LGTMVFRRNYV 329

  Fly   377 TAALSQLQLHTDTSSTSTMRNAGSNPPKTRNGGGKGRLYLNLSDDTDSEGGGHDIYSD------- 434
            :..|..:....:.|.|.:.|        ..|...:.|::.:|.|  ||.|..|.:...       
Zfish   330 SGGLFGIGSRDEGSLTGSER--------VDNVRLQNRMHPSLDD--DSIGSAHSLQERNIQELPW 384

  Fly   435 -------DDDDDRDAGGSALQRFLAVWALEEYLPVFQKQEIDLETLMLLTESDLKSLGLPLGPFR 492
                   ||||:.|.  |.|:.|||..::.|::|:.::::|||:.|:|.:::|||.:.:||||.:
Zfish   385 DEVELGLDDDDEPDT--SPLEVFLATQSMNEFIPILKREKIDLDALLLCSDNDLKGIHIPLGPRK 447

  Fly   493 KLTFAIQERRNALANPGPLVDSRL 516
            |:..|...|...|..|||:.|:.:
Zfish   448 KIMDACMRRLETLEEPGPIEDTEM 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SansNP_610829.1 ANK 6..118 CDD:238125 65/111 (59%)
Ank_2 6..96 CDD:289560 57/89 (64%)
ANK repeat 35..63 CDD:293786 19/27 (70%)
ANK repeat 65..96 CDD:293786 17/30 (57%)
Ank_2 70..149 CDD:289560 32/78 (41%)
SAM_USH1G_HARP 443..508 CDD:188916 23/64 (36%)
SAM 447..503 CDD:197735 21/55 (38%)
ush1gaXP_002661315.1 ANK 6..117 CDD:238125 65/110 (59%)
Ank_2 6..91 CDD:289560 56/84 (67%)
ANK repeat 31..62 CDD:293786 21/30 (70%)
ANK repeat 64..95 CDD:293786 17/30 (57%)
Ank_2 69..>117 CDD:289560 22/47 (47%)
SAM_USH1G 398..463 CDD:188985 24/66 (36%)
SAM 405..459 CDD:197735 20/53 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595570
Domainoid 1 1.000 57 1.000 Domainoid score I10847
eggNOG 1 0.900 - - E33208_3BEMZ
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56113
Inparanoid 1 1.050 241 1.000 Inparanoid score I3308
OMA 1 1.010 - - QHG50165
OrthoDB 1 1.010 - - D1344159at2759
OrthoFinder 1 1.000 - - FOG0002068
OrthoInspector 1 1.000 - - otm26438
orthoMCL 1 0.900 - - OOG6_108131
Panther 1 1.100 - - LDO PTHR24161
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2368
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

Return to query results.
Submit another query.