DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO3 and AT1G15860

DIOPT Version :10

Sequence 1:NP_610828.2 Gene:SCCRO3 / 36426 FlyBaseID:FBgn0033784 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_001185006.1 Gene:AT1G15860 / 838156 AraportID:AT1G15860 Length:236 Species:Arabidopsis thaliana


Alignment Length:235 Identity:62/235 - (26%)
Similarity:108/235 - (45%) Gaps:23/235 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 KRNSFKSLGLLNGSAPTMSDIITTAVQESMEVSHQTLSKLFDVYKDPDDEEMILTDGIERLCNDL 145
            :.:|.|..|....|..|  |:..:|..::.......:..||:.|.: ....:|..:|||.||::|
plant     3 RSSSKKKSGQSTESVTT--DLFRSASSKASNKEMDRIDHLFNQYAN-KSSSLIDPEGIEELCSNL 64

  Fly   146 NYQPDEFAILVLAWCLDASQMCRFTKVEFIEGLHKMRADTIDSIRVRLEQTIEMLKADAEMFKQL 210
            .....:..||:|||.:.|.:...||..|:..||..:|||||:.::..|.:..:.::..:. |...
plant    65 EVSHTDIRILMLAWKMKAEKQGYFTHEEWRRGLKALRADTINKLKKALPELEKEVRRPSN-FADF 128

  Fly   211 YRFTFRFGL-EPDQRVLSLEMAIDLWKLV----FTVQTPDLFSN----WI----HFLEKHPNIRR 262
            |.:.|.:.| |..|:.:.:|....|.::|    |..|. |.|..    ||    |.::.  :.:.
plant   129 YAYAFCYCLTEEKQKSIDIETICQLLEIVMGSTFRAQV-DYFVEYLKVWITQKSHIIQN--DYKV 190

  Fly   263 IPKDTWNMYLNFTEQC---DIQNYDDTEAWPSLFDDFVDY 299
            |..|.|.....|..:.   |:.:|:...|||.:.|:||::
plant   191 INMDQWMGLYRFCNEISFPDMGDYNPELAWPLILDNFVEW 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRO3NP_610828.2 Cullin_binding 189..299 CDD:460971 29/125 (23%)
AT1G15860NP_001185006.1 Cullin_binding 107..230 CDD:460971 29/126 (23%)

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