DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO3 and AT3G12760

DIOPT Version :10

Sequence 1:NP_610828.2 Gene:SCCRO3 / 36426 FlyBaseID:FBgn0033784 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_566436.1 Gene:AT3G12760 / 820458 AraportID:AT3G12760 Length:250 Species:Arabidopsis thaliana


Alignment Length:238 Identity:81/238 - (34%)
Similarity:130/238 - (54%) Gaps:6/238 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 SSRTPLKPAKANNCDTKRNSFKSLGLLNGSAPTMSDIITTAVQ-ESMEVSHQTLSKLFDVYKDPD 128
            |:|..|:...|....:::|:.::|...:.......|:..:..| .|.....:.|.:|::.|||| 
plant     7 SNRDKLQQFVAITGASEKNALQALKASDWHLEAAFDVFYSQPQPRSNAAEVRRLEELYNRYKDP- 70

  Fly   129 DEEMILTDGIERLCNDLNYQPDEFAILVLAWCLDASQMCRFTKVEFIEGLHKMRADTIDSIRVRL 193
            ..:|||.:||..|||||..:|.:...|||:|.::|:..|.|::.|||.||..:..|:|..::.:|
plant    71 YSDMILAEGISVLCNDLEVEPQDIVTLVLSWHMNAATACEFSRQEFISGLQALGVDSIGKLQEKL 135

  Fly   194 EQTIEMLKADAEMFKQLYRFTFRFGLEPDQRVLSLEMAIDLWKLVFTVQTPDLFSNWIHFLEKHP 258
            ......|| |.:.|.::|.|.|.:..|..|:.|:|:.||.:|:|:|..:...|.::|..||:...
plant   136 PFMRSELK-DEQKFHEIYNFAFGWAKEKGQKSLALDTAIGMWQLLFAEREWPLVTHWCDFLQDRH 199

  Fly   259 NIRRIPKDTWNMYLNFTEQCD--IQNYDDTEAWPSLFDDFVDY 299
            | :.|.||||...|.|:...|  :.|||...|||.|.|:||:|
plant   200 N-KAISKDTWAQLLEFSRMVDPVLSNYDAEGAWPYLIDEFVEY 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRO3NP_610828.2 Cullin_binding 189..299 CDD:460971 40/111 (36%)
AT3G12760NP_566436.1 UBA_DCNL 7..48 CDD:270535 7/40 (18%)
Cullin_binding 130..241 CDD:460971 40/112 (36%)

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