DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO3 and dcun1d1

DIOPT Version :10

Sequence 1:NP_610828.2 Gene:SCCRO3 / 36426 FlyBaseID:FBgn0033784 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_001016315.1 Gene:dcun1d1 / 549069 XenbaseID:XB-GENE-5967384 Length:259 Species:Xenopus tropicalis


Alignment Length:202 Identity:79/202 - (39%)
Similarity:124/202 - (61%) Gaps:11/202 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 VQESME--VSHQTLSKLFDVYKDPDDEEMILTDGIERLCNDLNYQPDEFAILVLAWCLDASQMCR 168
            ::||::  :..:.|.:|::.||||.||..|..|||::.|:||...|...::|::||...|:..|.
 Frog    52 IRESVKGSLDRKKLEQLYNRYKDPLDENKIGIDGIQQFCDDLALDPASVSVLIIAWKFRAATQCE 116

  Fly   169 FTKVEFIEGLHKMRADTIDSIRVRLEQTIEMLKADAEMFKQLYRFTFRFGLEPDQRVLSLEMAID 233
            |:|.||::|:.::..|:|:.::.:|.:..:.|| :...||..|:|||.|...|.|:.|.|||||.
 Frog   117 FSKQEFMDGMTELGCDSIEKLKAQLPKMEQELK-EPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA 180

  Fly   234 LWKLVFT--VQTPDLFSNWIHFLEKHPNIRRIPKDTWNMYLNFTEQC--DIQNYDDTEAWPSLFD 294
            .|.||.:  .:..||   |..||.:| :.|.|||||||:.|:|:...  |:.|||:..|||.|.|
 Frog   181 YWNLVLSGRFKFLDL---WNKFLLEH-HKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLID 241

  Fly   295 DFVDYEK 301
            |||::.:
 Frog   242 DFVEFAR 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRO3NP_610828.2 Cullin_binding 189..299 CDD:460971 49/113 (43%)
dcun1d1NP_001016315.1 UBA_DCNL1 1..51 CDD:270594
Cullin_binding 136..246 CDD:460971 49/114 (43%)
Blue background indicates that the domain is not in the aligned region.

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