DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO3 and SCCRO

DIOPT Version :10

Sequence 1:NP_610828.2 Gene:SCCRO3 / 36426 FlyBaseID:FBgn0033784 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_001246770.1 Gene:SCCRO / 39685 FlyBaseID:FBgn0036510 Length:297 Species:Drosophila melanogaster


Alignment Length:195 Identity:73/195 - (37%)
Similarity:107/195 - (54%) Gaps:13/195 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 EVSHQTLSKLFDVYKDPDDEEMILTDGIERLCNDLNYQPDEFAILVLAWCLDASQMCRFTKVEFI 175
            |:..:.:.:||..|:||.|...|.:.|:.....||:.:||...:|::||...|...|.|::.|||
  Fly    64 ELDRKRIEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFI 128

  Fly   176 EGLHKMRADTIDSIRVR---LEQTIEMLKADAEMFKQLYRFTFRFGLEPDQRVLSLEMAIDLWKL 237
            .|:..:..|:||.::.:   |||.:.    ||..||..|.|||.:..:|.|:.:.|||||..|.:
  Fly   129 NGMCDLGIDSIDKLKTKLPILEQELN----DAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCI 189

  Fly   238 VFTVQTPDLFSNWIHFL-EKHPNIRRIPKDTWNMYLNFTEQCD--IQNYDDTEAWPSLFDDFVDY 299
            |.:.:...| ..|..|| |||.  |.|.:||||:.|:|....|  :.|||...|||.|.||||::
  Fly   190 VLSGRFKFL-DIWCQFLEEKHK--RAISRDTWNLLLDFATNIDDRMSNYDSEGAWPVLIDDFVEW 251

  Fly   300  299
              Fly   252  251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRO3NP_610828.2 Cullin_binding 189..299 CDD:460971 47/115 (41%)
SCCRONP_001246770.1 UBA_like_SF 11..58 CDD:473871
Cullin_binding 141..251 CDD:460971 47/116 (41%)
Blue background indicates that the domain is not in the aligned region.

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