DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO3 and Dcun1d4

DIOPT Version :10

Sequence 1:NP_610828.2 Gene:SCCRO3 / 36426 FlyBaseID:FBgn0033784 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_001423912.1 Gene:Dcun1d4 / 360928 RGDID:1310422 Length:306 Species:Rattus norvegicus


Alignment Length:309 Identity:87/309 - (28%)
Similarity:141/309 - (45%) Gaps:23/309 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CFQSAAEQSMPTNASSPNSHNS---NSNACQTATSLANCYESVGINPN--ANERCALETD---EL 63
            |....:|:.........|||.|   |.:......:..|..|.||.:.:  .:.|....:|   ::
  Rat    10 CHPQGSEEMKHWKDFQLNSHLSTLANIHKIYHTLNKLNLTEDVGQDDHQTGSLRSCSSSDCFSKV 74

  Fly    64 LSSRTPLKPAKANNCDTKRNSFKSLGLLNGSAPTMSDIITTAVQESMEVSHQTLSKLFDVYKDPD 128
            :..|...:||..::...|::...|:.....|        |....|....|.:...:.|  |:...
  Rat    75 MPPRKKRRPASGDDLSAKKSRHDSMYRKYES--------TRIKTEEEAFSSKRCLEWF--YEYAG 129

  Fly   129 DEEMILTDGIERLCNDLNYQPDEFAILVLAWCLDASQMCRFTKVEFIEGLHKMRADTIDSIRVRL 193
            .|:.:..:|:|:.|.|:..:|:...:|||||.|||..|..||..|:::|:..::.||.:.:|..|
  Rat   130 TEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRTTL 194

  Fly   194 EQTIEMLKADAEMFKQLYRFTFRFGLEPDQRVLSLEMAIDLWKLVFTVQTPDLFSNWIHFLEKHP 258
            :....:|. |...||.:||:.|.|..|.|||.|.:..|..:..|:.....| ||..:..|||: .
  Rat   195 DYLRSLLN-DTTNFKLIYRYAFDFAREKDQRSLDINTAKCMLGLLLGKIWP-LFPVFHQFLEQ-S 256

  Fly   259 NIRRIPKDTWNMYLNF--TEQCDIQNYDDTEAWPSLFDDFVDYEKSRAL 305
            ..:.|.||.|...|.|  |...|:.|||:..|||.|.|:||::.|.:.:
  Rat   257 KYKVINKDQWCNVLEFSRTISLDLSNYDEDGAWPVLLDEFVEWYKDKQM 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRO3NP_610828.2 Cullin_binding 189..299 CDD:460971 41/111 (37%)
Dcun1d4NP_001423912.1 None

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