DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17019 and AT4G24204

DIOPT Version :9

Sequence 1:NP_001286365.1 Gene:CG17019 / 36425 FlyBaseID:FBgn0033783 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001119040.1 Gene:AT4G24204 / 6240443 AraportID:AT4G24204 Length:178 Species:Arabidopsis thaliana


Alignment Length:50 Identity:23/50 - (46%)
Similarity:29/50 - (57%) Gaps:9/50 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   652 LCKICMDAPIECVFLECGHMATCTSCG-KVLNE----CPICRQYIVRVVR 696
            ||.||.:....|.|:.|||.|||..|. ::|:|    |||||    ||:|
plant   123 LCVICFEERRNCFFVPCGHSATCRGCAQRILSEESKVCPICR----RVIR 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17019NP_001286365.1 FYVE_CARP 1..42 CDD:277289
zf-C3HC4_3 650..694 CDD:290631 20/46 (43%)
AT4G24204NP_001119040.1 zf-C3HC4_3 121..170 CDD:290631 22/49 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4202
eggNOG 1 0.900 - - E1_KOG4275
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm3123
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.900

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