DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17019 and RFFL

DIOPT Version :10

Sequence 1:NP_610827.2 Gene:CG17019 / 36425 FlyBaseID:FBgn0033783 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001017368.1 Gene:RFFL / 117584 HGNCID:24821 Length:363 Species:Homo sapiens


Alignment Length:718 Identity:153/718 - (21%)
Similarity:200/718 - (27%) Gaps:421/718 - (58%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CESCGVEFTVFRRKRACFDCKRYYCANCIAS-----RRCKRCSVFAQRPLSRTDLLKLKPKDLIF 62
            |:|||..|....||:.|.|||:.:|..|.:.     |.|..|..|......|.:|:|:|.|||..
Human    47 CKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQRFRATAFQREELMKMKVKDLRD 111

  Fly    63 YLQSKHISTEGCLEKEELVGLVLTH---VAQVDRSRGSNASSNSPGRGQANPIDSLKQSCQNFFS 124
            ||....||||.|.||||||.|||..   ::|.||:|.|..|                        
Human   112 YLSLHDISTEMCREKEELVLLVLGQQPVISQEDRTRASTLS------------------------ 152

  Fly   125 NLSDNISDSLASFDSKVTTKPPESRQPEVPTHIFEQPRVSTREIPTYASAVNGGPQHVHVQQQAT 189
                                      |:.|                              :|||.
Human   153 --------------------------PDFP------------------------------EQQAF 161

  Fly   190 TTNGGSQSSSSPSTSTQSSNNRDASSSSQAHVAHQEARNEEQEDAQSKSDCECSDEEIMATFSER 254
            .|.  ..||..|.||                                                  
Human   162 LTQ--PHSSMVPPTS-------------------------------------------------- 174

  Fly   255 VSISLKTDTSGRRVNAAAEPSPVDLANVDNGPAGNTAPSPGCSKPGSSSSKADASSQSSFEELGA 319
                                                        |...||.|.|:|         
Human   175 --------------------------------------------PNLPSSSAQATS--------- 186

  Fly   320 IGGISDESKANTDTNSSHLDQWQVLEVNRIEAVEETPTTSAADEILEVTLRSRPAVEGDDSEMGE 384
                                               .|                ||      ::.|
Human   187 -----------------------------------VP----------------PA------QVQE 194

  Fly   385 STQALNVNQRPANPSPAFYPAVPQRTKKVTRRRSDGYLNRRYHSSDDESPVAPGGPGLSLGLSTL 449
            :.||                              :|::     |.|.|.||              
Human   195 NQQA------------------------------NGHV-----SQDQEEPV-------------- 210

  Fly   450 SEHPEHGLHPHSHRQSCQRCGKNKTNIRRHVEKMRRHLENSQMSEEDIKRELQEFLTYLEQRTKS 514
                                         ::|.:.|                    ...|..|:|
Human   211 -----------------------------YLESVAR--------------------VPAEDETQS 226

  Fly   515 VDASDADSHAVSPLSVDAISVAAGGRSPDMPITPTIEFSPTQDEDIRWDDDEGIHVYAAPSDFEP 579
            :|:.|:                                                        |.|
Human   227 IDSEDS--------------------------------------------------------FVP 235

  Fly   580 TAGIDSRFVNLEDFEDLKDLEGLTVKQLKEVLMLHRVDYKGCCEKQELLDRVSRLWKTMRECPAV 644
                 .|..:|.|..||:|:|||||:||||:|..:.|:|||||||.||::||:||:|..:....:
Human   236 -----GRRASLSDLTDLEDIEGLTVRQLKEILARNFVNYKGCCEKWELMERVTRLYKDQKGLQHL 295

  Fly   645 EKLATDE------------LCKICMDAPIECVFLECGHMATCTSCGKVLNECPICRQYIVRVVRF 697
            ...|.|:            |||||||:||:||.||||||.|||.|||.:|||||||||::|.|..
Human   296 VSGAEDQNGGAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVIRAVHV 360

  Fly   698 FRA 700
            ||:
Human   361 FRS 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17019NP_610827.2 FYVE_CARP 1..42 CDD:277289 16/43 (37%)
RING-HC_CARP 651..698 CDD:438163 34/58 (59%)
RFFLNP_001017368.1 FYVE_CARP2 44..92 CDD:277309 16/44 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..209 21/238 (9%)
RING-HC_CARP2 312..361 CDD:438367 34/48 (71%)

Return to query results.
Submit another query.