DRSC/TRiP Functional Genomics Resources

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Protein Alignment sug and ZIC5

DIOPT Version :9

Sequence 1:NP_610826.1 Gene:sug / 36424 FlyBaseID:FBgn0033782 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_149123.3 Gene:ZIC5 / 85416 HGNCID:20322 Length:639 Species:Homo sapiens


Alignment Length:350 Identity:106/350 - (30%)
Similarity:146/350 - (41%) Gaps:89/350 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 AAYSDSGSWLADHHQHHQQQHQQHQQQMQHIRFPTPPITPPRPIAGYGYRQRTQSVIMKARGQQD 100
            ||.:.:.:....|.|||                 .||..||.|.|...:..:....:..|.|...
Human   314 AAAAAAAAGPGPHLQHH-----------------APPPAPPPPPAPAQHPHQHHPHLPGAAGAFL 361

  Fly   101 ELCRSPVEFPDDSKSCSSSSECGTASDFVCNWTD----------------------------CDR 137
            ...|.|::                 .:.:|.|.|                            |.:
Human   362 RYMRQPIK-----------------QELICKWIDPDELAGLPPPPPPPPPPPPPPPAGGAKPCSK 409

  Fly   138 VFDTLDALAQHVTQRHAIASLTDGLYYCRWRGCQRSERGFNARYKMLVHTRTHTKEKPHRCHL-- 200
            .|.|:..|..|||..| :.......:.|.|..|.|..:.|.|:||::.|.|.||.|||..|..  
Human   410 TFGTMHELVNHVTVEH-VGGPEQSSHVCFWEDCPREGKPFKAKYKLINHIRVHTGEKPFPCPFPG 473

  Fly   201 CEKSFSRAENLKIHIRSHSGEKPYKCSFEGCQKAYSNSSDRFKHTRTHSMEKPYMCKVAGCQKRY 265
            |.|.|:|:||||||.|:|:||||:||.|:||.:.::|||||.||:..|:.:|||.||:.||.|.|
Human   474 CGKVFARSENLKIHKRTHTGEKPFKCEFDGCDRKFANSSDRKKHSHVHTSDKPYYCKIRGCDKSY 538

  Fly   266 TDPSSLRKHVKTFKHSIHL-------------IASQPLTLPSVPCLLEASSESAFTCLPAASSVE 317
            |.|||||||:|     ||.             ....|:..|..|.|..|.|.|: |..|..:::.
Human   539 THPSSLRKHMK-----IHCKSPPPSPGPLGYSSVGTPVGAPLSPVLDPARSHSS-TLSPQVTNLN 597

  Fly   318 -----STSSSSSARYYDDSNNEPSD 337
                 ..|.:.|..:...||...|:
Human   598 EWYVCQASGAPSHLHTPSSNGTTSE 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sugNP_610826.1 C2H2 Zn finger 170..190 CDD:275368 8/19 (42%)
zf-H2C2_2 183..207 CDD:290200 11/25 (44%)
COG5048 192..>271 CDD:227381 45/80 (56%)
C2H2 Zn finger 198..218 CDD:275368 12/21 (57%)
zf-H2C2_2 210..237 CDD:290200 16/26 (62%)
C2H2 Zn finger 226..248 CDD:275368 11/21 (52%)
C2H2 Zn finger 256..277 CDD:275368 14/20 (70%)
ZIC5NP_149123.3 zf_ZIC 366..429 CDD:408166 12/80 (15%)
COG5048 <405..551 CDD:227381 71/151 (47%)
C2H2 Zn finger 441..461 CDD:275368 8/19 (42%)
C2H2 Zn finger 469..491 CDD:275368 12/21 (57%)
C2H2 Zn finger 499..521 CDD:275368 11/21 (52%)
C2H2 Zn finger 529..551 CDD:275368 15/26 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X217
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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