DRSC/TRiP Functional Genomics Resources

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Protein Alignment sug and GLIS2

DIOPT Version :9

Sequence 1:NP_610826.1 Gene:sug / 36424 FlyBaseID:FBgn0033782 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001305847.1 Gene:GLIS2 / 84662 HGNCID:29450 Length:524 Species:Homo sapiens


Alignment Length:229 Identity:109/229 - (47%)
Similarity:129/229 - (56%) Gaps:43/229 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 ITPPRPIAGYGYRQRTQSVIMKARGQQDELCRSPVEFPDDSKSCSSSSECGTASDFVCNWTDCDR 137
            :|||:                       :.|.|| :.|             .....||.|..|::
Human   150 LTPPK-----------------------DKCLSP-DLP-------------LPKQLVCRWAKCNQ 177

  Fly   138 VFDTLDALAQHVTQRHAIASLTDGLYYCRWRGCQRSERGFNARYKMLVHTRTHTKEKPHRCHLCE 202
            :|:.|..|..||...| :....|..|.|.|.||.|..||||||||||:|.||||.||||||..|.
Human   178 LFELLQDLVDHVNDYH-VKPEKDAGYCCHWEGCARHGRGFNARYKMLIHIRTHTNEKPHRCPTCS 241

  Fly   203 KSFSRAENLKIHIRSHSGEKPYKCSFEGCQKAYSNSSDRFKHTRTHSMEKPYMCKVAGCQKRYTD 267
            |||||.||||||.|||:|||||.|.:|||.|.||||||||||||||.::|||.||:.||.|||||
Human   242 KSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMPGCHKRYTD 306

  Fly   268 PSSLRKHVKTFKHSI-----HLIASQPLTLPSVP 296
            |||||||:|...|.:     .|:..:|...|.:|
Human   307 PSSLRKHIKAHGHFVSHEQQELLQLRPPPKPPLP 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sugNP_610826.1 C2H2 Zn finger 170..190 CDD:275368 14/19 (74%)
zf-H2C2_2 183..207 CDD:290200 17/23 (74%)
COG5048 192..>271 CDD:227381 59/78 (76%)
C2H2 Zn finger 198..218 CDD:275368 14/19 (74%)
zf-H2C2_2 210..237 CDD:290200 19/26 (73%)
C2H2 Zn finger 226..248 CDD:275368 17/21 (81%)
C2H2 Zn finger 256..277 CDD:275368 16/20 (80%)
GLIS2NP_001305847.1 Interaction with CTNND1. /evidence=ECO:0000250 35..174 10/60 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..62
Transcription activation. /evidence=ECO:0000250 71..137
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..114
Transcription repression. /evidence=ECO:0000250 148..171 8/57 (14%)
C2H2 Zn finger 213..229 CDD:275368 12/15 (80%)
COG5048 233..>327 CDD:227381 65/93 (70%)
C2H2 Zn finger 237..257 CDD:275368 14/19 (74%)
C2H2 Zn finger 265..287 CDD:275368 17/21 (81%)
C2H2 Zn finger 295..317 CDD:275368 17/21 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..480
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158700
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BJB2
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2875
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006993
OrthoInspector 1 1.000 - - oto91084
orthoMCL 1 0.900 - - OOG6_109933
Panther 1 1.100 - - LDO PTHR19818
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4587
SonicParanoid 1 1.000 - - X217
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.680

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