DRSC/TRiP Functional Genomics Resources

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Protein Alignment sug and Zic5

DIOPT Version :9

Sequence 1:NP_610826.1 Gene:sug / 36424 FlyBaseID:FBgn0033782 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_075363.1 Gene:Zic5 / 65100 MGIID:1929518 Length:622 Species:Mus musculus


Alignment Length:308 Identity:103/308 - (33%)
Similarity:138/308 - (44%) Gaps:68/308 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 AAYSDSGSWLADHHQHHQQQHQQHQQQMQHIRFPTPPITPPRPIAGYGYRQRTQSVIMKARGQQD 100
            ||.:.:.:....|.|||                ..||..||.| |.:.:...    :..|.|...
Mouse   312 AAAAAAAAGPGPHLQHH----------------APPPAPPPAP-APHPHHPH----LPGAAGAFL 355

  Fly   101 ELCRSPVEFPDDSKSCSSSSECGTASDFVCNWTD-----------------CDRVFDTLDALAQH 148
            ...|.|::                 .:.:|.|.|                 |.:.|.|:..|..|
Mouse   356 RYMRQPIK-----------------RELICKWLDPEELAGPPASADSGVKPCSKTFGTMHELVNH 403

  Fly   149 VTQRHAIASLTDGLYYCRWRGCQRSERGFNARYKMLVHTRTHTKEKPHRCHL--CEKSFSRAENL 211
            ||..| :.......:.|.|..|.|..:.|.|:||::.|.|.||.|||..|..  |.|.|:|:|||
Mouse   404 VTVEH-VGGPEQSSHVCFWEDCPREGKPFKAKYKLINHIRVHTGEKPFPCPFPGCGKVFARSENL 467

  Fly   212 KIHIRSHSGEKPYKCSFEGCQKAYSNSSDRFKHTRTHSMEKPYMCKVAGCQKRYTDPSSLRKHVK 276
            |||.|:|:||||:||.|:||.:.::|||||.||:..|:.:|||.||:.||.|.||.|||||||:|
Mouse   468 KIHKRTHTGEKPFKCEFDGCDRKFANSSDRKKHSHVHTSDKPYYCKIRGCDKSYTHPSSLRKHMK 532

  Fly   277 TFKHSIHLIASQPLTLPSVPCLLEASSESAFTCLPAASSVESTSSSSS 324
                 ||  ...|   |..|..|..||.......|.:..::.|.|.||
Mouse   533 -----IH--CKSP---PPSPGALGYSSVGTPVGDPLSPVLDPTRSRSS 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sugNP_610826.1 C2H2 Zn finger 170..190 CDD:275368 8/19 (42%)
zf-H2C2_2 183..207 CDD:290200 11/25 (44%)
COG5048 192..>271 CDD:227381 45/80 (56%)
C2H2 Zn finger 198..218 CDD:275368 12/21 (57%)
zf-H2C2_2 210..237 CDD:290200 16/26 (62%)
C2H2 Zn finger 226..248 CDD:275368 11/21 (52%)
C2H2 Zn finger 256..277 CDD:275368 14/20 (70%)
Zic5NP_075363.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..171
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..223
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..251
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 321..349 10/48 (21%)
COG5048 <388..550 CDD:227381 78/172 (45%)
C2H2 Zn finger 424..444 CDD:275368 8/19 (42%)
zf-H2C2_2 437..463 CDD:290200 11/25 (44%)
C2H2 Zn finger 452..474 CDD:275368 12/21 (57%)
zf-H2C2_2 466..493 CDD:290200 16/26 (62%)
C2H2 Zn finger 482..504 CDD:275368 11/21 (52%)
zf-C2H2 510..534 CDD:278523 16/28 (57%)
C2H2 Zn finger 512..534 CDD:275368 15/26 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 531..573 14/50 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 590..622
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X217
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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