DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sug and ZNF678

DIOPT Version :10

Sequence 1:NP_610826.1 Gene:sug / 36424 FlyBaseID:FBgn0033782 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_848644.2 Gene:ZNF678 / 339500 HGNCID:28652 Length:580 Species:Homo sapiens


Alignment Length:263 Identity:68/263 - (25%)
Similarity:97/263 - (36%) Gaps:80/263 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 ECGTASDFVCNW-------------------TDCDRVFDTLDALAQHVTQRHAIASLTDGLYYCR 166
            |||.    |.||                   .:||:||:....|..| .:.|:            
Human   212 ECGK----VFNWWSQLTNHKKIHTGEKPYKCDECDKVFNWWSQLTSH-KKIHS------------ 259

  Fly   167 WRG-----CQRSERGFNARYKMLVHTRTHTKEKPHRCHLCEKSFSRAENLKIHIRSHSGEKPYKC 226
              |     |:...:.|.....:..|.|.||.|||::|..|.|:|::..||..|.|.|:|||||||
Human   260 --GEKPYPCEECGKAFTQFSNLTQHKRIHTGEKPYKCKECCKAFNKFSNLTQHKRIHTGEKPYKC 322

  Fly   227 SFEGCQKAYSNSSDRFKHTRTHSMEKPYMCKVAGCQKRYTDPSSLRKHV---------------K 276
              |.|...::..|...:|.|.|:.||||.|:  .|.|.:|..:||.:|.               |
Human   323 --EECGNVFNECSHLTRHRRIHTGEKPYKCE--ECGKAFTQFASLTRHKRIHTGEKPYQCEECGK 383

  Fly   277 TFKHSIHLIASQPLTLPSVPCLLEA------------------SSESAFTCLPAASSVESTSSSS 323
            ||....||.:.:.:.....|...|.                  :.|..:.|.....:....||.:
Human   384 TFNRCSHLSSHKRIHTGEKPYKCEECGRTFTQFSNLTQHKRIHTGEKPYKCKECGKAFNKFSSLT 448

  Fly   324 SAR 326
            ..|
Human   449 QHR 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sugNP_610826.1 C2H2 Zn finger 170..190 CDD:275368 4/19 (21%)
COG5048 192..>271 CDD:227381 33/78 (42%)
C2H2 Zn finger 198..218 CDD:275368 8/19 (42%)
C2H2 Zn finger 226..248 CDD:275368 6/21 (29%)
C2H2 Zn finger 256..277 CDD:275368 7/35 (20%)
ZNF678NP_848644.2 KRAB 43..83 CDD:460171
COG5048 138..536 CDD:227381 68/263 (26%)
C2H2 Zn finger 154..174 CDD:275368
C2H2 Zn finger 182..202 CDD:275368
C2H2 Zn finger 210..230 CDD:275368 6/21 (29%)
C2H2 Zn finger 238..258 CDD:275368 6/20 (30%)
C2H2 Zn finger 266..286 CDD:275368 4/19 (21%)
C2H2 Zn finger 294..314 CDD:275368 8/19 (42%)
C2H2 Zn finger 322..342 CDD:275368 6/21 (29%)
C2H2 Zn finger 350..370 CDD:275368 7/21 (33%)
C2H2 Zn finger 378..398 CDD:275368 5/19 (26%)
C2H2 Zn finger 406..426 CDD:275368 1/19 (5%)
C2H2 Zn finger 434..454 CDD:275368 4/18 (22%)
C2H2 Zn finger 462..482 CDD:275368
C2H2 Zn finger 490..510 CDD:275368
C2H2 Zn finger 518..538 CDD:275368
zf-H2C2_2 530..555 CDD:463886
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.