Protein Alignment sug and Gli2

DIOPT Version :10

• Sequence 1: NP_610826.1
• Gene: sug / 36424
• FlyBaseID: FBgn0033782
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_001100639.2
• Gene: Gli2 / 304729
• RGDID: 1309270
• Length: 1544
• Species: Rattus norvegicus
• Alignment Length: 402
• Identity: 131/402 - (32%)
• Similarity: 180/402 - (44%)
• Gaps: 111/402 - (27%)

  Fly    16 RGI-----YEPPLGYFTPYNTPPYIAAY--------------SDSGSWLADHHQHHQQQHQQHQQ 61
            ||:     :.|||  ..|  :|.::|..              |:|.:.::|.:|:.|.....
  Rat   303 RGLGSAFGHTPPL--IQP--SPTFLAQQPMTLTSITVPTQLGSNSSNCISDANQNKQNSESA--- 360

  Fly    62 QMQHIRFPTPPITPPRPIAGYGYRQRTQSVIMKARG---------QQDELCRSPVEFPDDSKSCS 117
                :.....|||          ..:...|..:|.|         .|::|.        |.|...
  Rat   361 ----VSSTVNPIT----------IHKRSKVKTEAEGLRPASPLGLTQEQLA--------DLKEDL 403

  Fly   118 SSSECGTASDFV-----CNWTDCDRVFDTLDALAQHVTQRHAIASLTDGLYYCRWRGCQRSERGF 177
            ...:|...::.|     |:|.||.:.:||.:.|..|:...|......:  :.|||:.|.|.::.|
  Rat   404 DRDDCKQEAEVVIYETNCHWADCTKEYDTQEQLVHHINNEHIHGEKKE--FVCRWQACTREQKPF 466

  Fly   178 NARYKMLVHTRTHTKEKPHRCHL--CEKSFSRAENLKIHIRSHSGEKPYKCSFEGCQKAYSNSSD 240
            .|:|.::||.|.||.||||:|..  |.|::||.||||.|:|||:|||||.|..|||.||:||:||
  Rat   467 KAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASD 531

  Fly   241 RFKH-TRTHSMEKPYMCKVAGCQKRYTDPSSLRKHVKTF-----------KHSIHLIASQPLTLP 293
            |.|| .||||.||||:||:.||.|||||||||||||||.           ::.:||.|
  Rat   532 RAKHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHLRA------- 589

  Fly   294 SVPCL--------------------LEASSES--AFTCL--PAASSVESTSSSSSARYYDDSNNE 334
              |.|                    :||||.|  |..||  .|..:..|....||.......::|
  Rat   590 --PLLKENGDNEAGAEPGGRGPEESVEASSTSHTAEDCLHIKAIKTESSGLCQSSPGAQSSCSSE 652

  Fly   335 PSDYSLKPKQDA 346
            ||.....|..|:
  Rat   653 PSPLGSVPNNDS 664

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sug	NP_610826.1	C2H2 Zn finger	170..190	CDD:275368	8/19 (42%)
		COG5048	192..>271	CDD:227381	54/81 (67%)
		C2H2 Zn finger	198..218	CDD:275368	11/21 (52%)
		C2H2 Zn finger	226..248	CDD:275368	14/22 (64%)
		C2H2 Zn finger	256..277	CDD:275368	17/20 (85%)
Gli2	NP_001100639.2	SFP1	<481..571	CDD:227516	62/89 (70%)
		C2H2 Zn finger	487..509	CDD:275368	11/21 (52%)
		C2H2 Zn finger	517..540	CDD:275368	14/22 (64%)
		C2H2 Zn finger	548..569	CDD:275368	17/20 (85%)