DRSC/TRiP Functional Genomics Resources

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Protein Alignment sug and Glis2

DIOPT Version :9

Sequence 1:NP_610826.1 Gene:sug / 36424 FlyBaseID:FBgn0033782 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_038941774.1 Gene:Glis2 / 302946 RGDID:1309177 Length:522 Species:Rattus norvegicus


Alignment Length:230 Identity:111/230 - (48%)
Similarity:130/230 - (56%) Gaps:44/230 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 ITPPRPIAGYGYRQRTQSVIMKARGQQDELCRSPVEFPDDSKSCSSSSECGTASDFVCNWTDCDR 137
            :|||:                       :.|.|| |.|             .|...||.|..|::
  Rat   150 LTPPK-----------------------DKCLSP-ELP-------------LAKQLVCRWAKCNQ 177

  Fly   138 VFDTLDALAQHVTQRHAIASLTDGLYYCRWRGCQRSERGFNA-RYKMLVHTRTHTKEKPHRCHLC 201
            :|:.|..|..||...| :....|..|.|.|.||.|..||||| |||||:|.||||.||||||..|
  Rat   178 LFELLQDLVDHVNDHH-VKPEQDARYCCHWEGCARHGRGFNASRYKMLIHIRTHTNEKPHRCPTC 241

  Fly   202 EKSFSRAENLKIHIRSHSGEKPYKCSFEGCQKAYSNSSDRFKHTRTHSMEKPYMCKVAGCQKRYT 266
            .|||||.||||||.|||:|||||.|.:|||.|.||||||||||||||.::|||.||:.||.||||
  Rat   242 NKSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMPGCHKRYT 306

  Fly   267 DPSSLRKHVKTFKHSI-----HLIASQPLTLPSVP 296
            ||||||||:|...|.:     .|:..:|...|.:|
  Rat   307 DPSSLRKHIKAHGHFVSHEQQELLQLRPPPKPPLP 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sugNP_610826.1 C2H2 Zn finger 170..190 CDD:275368 14/20 (70%)
zf-H2C2_2 183..207 CDD:290200 17/23 (74%)
COG5048 192..>271 CDD:227381 59/78 (76%)
C2H2 Zn finger 198..218 CDD:275368 14/19 (74%)
zf-H2C2_2 210..237 CDD:290200 19/26 (73%)
C2H2 Zn finger 226..248 CDD:275368 17/21 (81%)
C2H2 Zn finger 256..277 CDD:275368 16/20 (80%)
Glis2XP_038941774.1 C2H2 Zn finger 213..230 CDD:275368 12/16 (75%)
COG5048 234..>328 CDD:227381 65/93 (70%)
C2H2 Zn finger 238..258 CDD:275368 14/19 (74%)
C2H2 Zn finger 266..288 CDD:275368 17/21 (81%)
C2H2 Zn finger 296..318 CDD:275368 17/21 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352709
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BJB2
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006993
OrthoInspector 1 1.000 - - oto98176
orthoMCL 1 0.900 - - OOG6_109933
Panther 1 1.100 - - LDO PTHR19818
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X217
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.700

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